Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RPL21P47-201ENST00000483696 477 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-1095P-201ENST00000516148 108 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-1102P-201ENST00000516149 96 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 OR5BN1P-201ENST00000532955 829 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 EEF1B2P4-201ENST00000551398 348 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 LSM6P2-201ENST00000552208 177 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 HMGB1P14-201ENST00000557424 591 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 NIFKP8-201ENST00000560500 874 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 OR4H6P-202ENST00000603819 340 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AP002826.1-201ENST00000608835 315 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 VN1R9P-201ENST00000614184 867 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC025588.4-201ENST00000615802 908 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 CYP3A51P-201ENST00000633513 256 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 CRYM-AS1-204ENST00000637983 556 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-792P-201ENST00000363490 107 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-481P-201ENST00000384194 107 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-198P-201ENST00000384258 104 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MIR518C-201ENST00000384822 101 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 UBE2V1P15-201ENST00000407776 448 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 FCF1P1-201ENST00000432690 571 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MTND4LP10-201ENST00000435146 291 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC129850.1-201ENST00000436203 508 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MTCO3P43-201ENST00000440974 771 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AL589880.1-201ENST00000448271 287 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC025181.1-201ENST00000477507 416 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC025768.1-201ENST00000510057 267 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC109471.1-201ENST00000511631 612 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 RNA5SP24-201ENST00000516478 95 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 SNORA76.2-201ENST00000517095 137 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 RNU1-104P-201ENST00000517280 175 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 HMGB1P41-201ENST00000520234 440 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC124293.1-201ENST00000530034 493 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC009097.3-201ENST00000563557 1018 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 BPTFP1-201ENST00000579209 492 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC090616.3-201ENST00000582184 217 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 MIR5194-201ENST00000582634 120 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC060766.3-201ENST00000591442 263 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 ZNF92P2-201ENST00000600543 1059 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AL049779.4-201ENST00000604500 156 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC010738.1-201ENST00000604970 987 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC012443.1-201ENST00000605605 231 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 CTSLP2-204ENST00000629029 392 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC132825.7-201ENST00000638744 335 ntBASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV41A0A0B4J266 AC093536.2-201ENST00000565257 1406 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AL359693.1-201ENST00000614959 2407 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RNU1-105P-201ENST00000363470 161 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 SNORA25.6-201ENST00000364121 118 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 SNORD114-30-201ENST00000364448 72 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 U3.12-201ENST00000364498 214 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 DEFA7P-201ENST00000382676 285 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RNU1-138P-201ENST00000384093 164 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AL513328.1-201ENST00000446460 224 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 TRBV26-201ENST00000456572 344 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 NAMPTP2-201ENST00000505629 1115 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RPL37P25-201ENST00000507308 276 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-27P-201ENST00000516146 107 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms