Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 OR5H5P-201ENST00000503164 928 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AC108120.2-201ENST00000512973 294 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.67□□□□□ -2.14
AP4S1Q9Y587 SETP7-201ENST00000552169 453 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 EIF4BP1-201ENST00000554881 351 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AC009063.1-201ENST00000563342 702 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 HSPE1P7-201ENST00000604681 321 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 AL359535.1-201ENST00000612100 1087 ntBASIC1.67□□□□□ -2.14
AP4S1Q9Y587 MTCO1P4-201ENST00000520516 1409 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 SNORA5B-201ENST00000363786 132 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AL139413.1-201ENST00000421309 217 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 USP9YP15-201ENST00000442391 422 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 RNA5SP233-201ENST00000459153 113 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC097493.1-201ENST00000463958 372 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 COL6A4P2-205ENST00000509855 506 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 AC068880.5-201ENST00000624331 290 ntBASIC1.66□□□□□ -2.14
AP4S1Q9Y587 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
AP4S1Q9Y587 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.65□□□□□ -2.14
AP4S1Q9Y587 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
AP4S1Q9Y587 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 CYCSP32-201ENST00000440548 321 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 RPS3AP12-201ENST00000443616 753 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AL672167.3-201ENST00000465951 960 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC114781.4-201ENST00000513707 639 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC016065.2-201ENST00000514530 444 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC009097.3-201ENST00000563557 1018 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC107954.1-201ENST00000565906 727 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC068790.3-201ENST00000602988 553 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 AC079089.3-201ENST00000603094 673 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 MIR92B-201ENST00000607575 96 ntBASIC1.65□□□□□ -2.15
AP4S1Q9Y587 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
AP4S1Q9Y587 SNORA1.3-201ENST00000384676 136 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AL356320.1-201ENST00000429616 163 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 MTCO1P45-201ENST00000431457 267 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AL645638.1-201ENST00000440519 361 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 snoU13.3-201ENST00000459441 104 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AP000867.2-201ENST00000532468 320 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 CYCSP26-201ENST00000534107 320 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC135178.6-201ENST00000605314 398 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC090525.3-201ENST00000605601 189 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC005332.10-201ENST00000612725 619 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC025016.1-201ENST00000616746 682 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC024023.1-201ENST00000624530 922 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AP001002.2-201ENST00000625137 386 ntBASIC1.64□□□□□ -2.15
AP4S1Q9Y587 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 ARL2BPP3-201ENST00000421226 480 ntBASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AC010099.1-201ENST00000455434 375 ntBASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AC079203.1-201ENST00000487972 404 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms