Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC004975.1-201ENST00000428733 208 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC104563.1-201ENST00000476147 376 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 ACTR3P3-201ENST00000480448 893 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AP002453.2-201ENST00000533503 320 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 RPL21P5-201ENST00000554662 472 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC025884.1-201ENST00000556034 378 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC007224.1-201ENST00000564410 144 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MIR5047-201ENST00000579212 100 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MTATP6P3-201ENST00000581686 676 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 HMGN1P30-201ENST00000589286 268 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AL591034.3-201ENST00000605511 685 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC068944.2-201ENST00000610373 403 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MIR6867-201ENST00000610636 67 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 ZYXP1-201ENST00000617638 118 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MIR6500-201ENST00000622700 86 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 AC112200.1-201ENST00000625015 234 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 MTND5P33-201ENST00000571250 1450 ntBASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.2□□□□□ -1.9
MRPS28Q9Y2Q9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC027514.1-201ENST00000588561 1603 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 U1.1-201ENST00000384101 164 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-339P-201ENST00000384310 107 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-878P-201ENST00000384578 110 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 MIR1250-201ENST00000408098 113 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 FCF1P9-201ENST00000412546 282 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL589872.1-201ENST00000426602 288 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC006989.1-201ENST00000427212 131 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC092017.2-201ENST00000427600 362 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 HMGB1P12-201ENST00000438594 598 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL353691.1-201ENST00000451332 387 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU7-170P-201ENST00000459303 61 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RPS4XP13-201ENST00000483219 789 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC112204.1-201ENST00000502591 103 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC011352.1-201ENST00000512300 793 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RN7SKP298-201ENST00000515950 94 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU2-46P-201ENST00000517038 113 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-430P-201ENST00000517078 107 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-201P-201ENST00000517100 61 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 MTND4LP26-201ENST00000518144 282 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 OR5G4P-201ENST00000525251 760 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AP003497.1-201ENST00000528472 562 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC053481.3-201ENST00000577881 843 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC007566.2-201ENST00000603642 413 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL513477.2-201ENST00000607858 568 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AL391813.2-201ENST00000609113 322 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC007684.1-201ENST00000609671 477 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC108479.2-201ENST00000617314 601 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 U73479.1-201ENST00000618062 168 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC136475.10-201ENST00000620253 385 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 AC012150.2-201ENST00000621300 544 ntBASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms