Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNA5SP97-201ENST00000365006 84 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 U3.15-201ENST00000365398 212 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL590002.1-201ENST00000406554 418 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL359704.1-201ENST00000411586 781 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC245052.5-201ENST00000416320 649 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 USP9YP36-201ENST00000424581 829 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC006946.1-201ENST00000429106 328 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 RPL7P52-201ENST00000449200 742 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC013267.1-201ENST00000458227 267 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 RBM43P1-201ENST00000476891 1081 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 NIPA2P2-201ENST00000496376 1083 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 NDUFB4P9-201ENST00000511646 388 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC022616.6-201ENST00000520479 119 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AP001893.2-201ENST00000526949 202 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC024224.1-201ENST00000538284 609 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC012417.1-201ENST00000582307 1039 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC025588.3-201ENST00000604182 274 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC115621.1-201ENST00000604653 858 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AL590282.1-201ENST00000610379 1136 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 AC092125.1-201ENST00000562568 1995 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 FAM35DP-201ENST00000323387 2712 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP322-201ENST00000363617 119 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-1103P-201ENST00000384150 107 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 Y_RNA.450-201ENST00000384198 113 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-195P-201ENST00000411352 109 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC008065.1-201ENST00000428525 348 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 FCF1P1-201ENST00000432690 571 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL451074.3-201ENST00000437709 472 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 WASF1P1-201ENST00000447560 1131 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC027673.1-201ENST00000456245 405 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL359385.1-201ENST00000456509 365 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 FCF1P3-201ENST00000496394 590 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 SETP2-201ENST00000553886 926 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 MIR548S-201ENST00000581352 82 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AL451044.1-201ENST00000604867 238 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC121334.2-201ENST00000605387 271 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC113194.1-201ENST00000606037 500 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC092954.2-201ENST00000609103 430 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 BX664608.1-201ENST00000610519 487 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC039056.2-201ENST00000622261 511 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 AC112200.1-201ENST00000625015 234 ntBASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX2IPQ9Y2D8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP258-201ENST00000362750 119 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms