Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MRPL50P4-201ENST00000446432 475 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 FCF1P6-201ENST00000456841 595 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 SCARNA13-201ENST00000516672 275 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AC027309.2-201ENST00000520566 192 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AC090502.2-201ENST00000549267 280 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 YWHAZP1-201ENST00000556286 722 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 RPL12P50-201ENST00000603116 116 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL392048.1-201ENST00000613946 534 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 CYP3A51P-201ENST00000633513 256 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 MTCO1P23-201ENST00000415223 1526 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 Z99496.1-201ENST00000469424 1477 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 RNU2-28P-201ENST00000410457 189 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL389915.1-201ENST00000422463 466 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 SEPT7P5-201ENST00000434048 306 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC004866.2-201ENST00000438285 481 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL359385.1-201ENST00000456509 365 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC006390.1-201ENST00000508068 283 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AP001189.2-201ENST00000527320 189 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 LRRC6P1-201ENST00000532188 885 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 ELOCP31-201ENST00000540463 467 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC008127.2-201ENST00000549925 1075 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL355836.1-201ENST00000555951 870 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC074050.1-201ENST00000563247 211 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC012493.2-201ENST00000595083 291 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL606834.3-201ENST00000602615 496 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC069431.2-201ENST00000604149 1099 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL139022.2-201ENST00000606934 443 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL391834.2-201ENST00000609982 546 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC140725.3-201ENST00000616193 880 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AL158163.2-201ENST00000619110 700 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 CR381653.2-201ENST00000624041 768 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC010872.1-201ENST00000624225 675 ntBASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMC3Q9UQE7 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC016769.3-201ENST00000396562 315 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 RPL7P49-201ENST00000471402 708 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 RPS27AP9-201ENST00000477681 438 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 RAC1P5-201ENST00000512182 576 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 SNORA74D-201ENST00000516404 141 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AL022067.1-201ENST00000602426 454 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC024153.1-201ENST00000603103 365 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC011458.1-201ENST00000604034 617 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC091946.2-201ENST00000606105 291 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC069200.1-201ENST00000609511 323 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC104763.3-201ENST00000613765 618 ntBASIC3.23□□□□□ -1.89
SMC3Q9UQE7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
SMC3Q9UQE7 AC006378.2-201ENST00000623178 2476 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 MTND4P9-201ENST00000507819 1346 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 RNU6-173P-201ENST00000364215 104 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms