Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC135721.1-201ENST00000497954 479 ntBASIC2.61□□□□□ -1.99
SHANK2Q9UPX8 AL590099.1-201ENST00000615276 138 ntBASIC2.61□□□□□ -1.99
SHANK2Q9UPX8 SNHG22-203ENST00000617833 660 ntBASIC2.61□□□□□ -1.99
SHANK2Q9UPX8 AC090617.7-201ENST00000623952 126 ntBASIC2.61□□□□□ -1.99
SHANK2Q9UPX8 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
SHANK2Q9UPX8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-1-201ENST00000383898 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-42P-201ENST00000384165 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-36P-201ENST00000384172 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-4P-201ENST00000384205 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-5P-201ENST00000384238 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-3P-201ENST00000384314 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-2-201ENST00000384627 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-9-201ENST00000384776 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-33P-201ENST00000384793 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 AC092832.1-201ENST00000422934 400 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RPS7P2-201ENST00000435134 607 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RAB9AP5-201ENST00000437794 597 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RAB9AP2-201ENST00000443911 597 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 AC113368.1-201ENST00000603736 382 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 RNU6-6P-201ENST00000606623 107 ntBASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.6□□□□□ -1.99
SHANK2Q9UPX8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC240504.1-201ENST00000395709 845 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC090453.1-201ENST00000495560 436 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC090255.1-201ENST00000495779 349 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 RNU1-40P-201ENST00000516816 164 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 RNU1-97P-201ENST00000516872 164 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 AC022709.1-201ENST00000615967 87 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 MTND5P3-201ENST00000438536 1800 ntBASIC2.59□□□□□ -1.99
SHANK2Q9UPX8 DCAF13P1-201ENST00000495256 1330 ntBASIC2.59□□□□□ -2
SHANK2Q9UPX8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SHANK2Q9UPX8 SNORA16.1-201ENST00000364597 132 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 RPL17P12-201ENST00000413391 526 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 RNU1-123P-201ENST00000458950 160 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 AC012170.1-201ENST00000495139 359 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 AIG1P1-201ENST00000503376 148 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 RNA5SP102-201ENST00000516865 106 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 HSPE1P20-201ENST00000538133 289 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHANK2Q9UPX8 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 CFTRP2-201ENST00000634304 199 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHANK2Q9UPX8 MTND4P1-201ENST00000457501 1466 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
SHANK2Q9UPX8 RNA5SP27-201ENST00000363839 119 ntBASIC2.58□□□□□ -2
SHANK2Q9UPX8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.58□□□□□ -2
SHANK2Q9UPX8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHANK2Q9UPX8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 CASP3P1-201ENST00000446037 609 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 RPS4XP11-201ENST00000446897 772 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AC239860.2-201ENST00000525886 270 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHANK2Q9UPX8 AC124283.4-201ENST00000581815 456 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 HPVC1-201ENST00000629899 1198 ntBASIC2.57□□□□□ -2
SHANK2Q9UPX8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHANK2Q9UPX8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHANK2Q9UPX8 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 AC013268.2-201ENST00000420753 337 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 OR51B8P-201ENST00000449892 769 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 USP9YP10-201ENST00000454868 628 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 HMGB3P30-201ENST00000457863 606 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 AP000873.1-201ENST00000463987 400 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHANK2Q9UPX8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 MIR4716-201ENST00000579628 84 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 AC103987.3-201ENST00000582071 292 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 AC067838.1-201ENST00000606064 577 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms