Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SNORA16.2-201ENST00000390991 127 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 MIR548I3-201ENST00000408378 149 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 MIR548I1-201ENST00000408810 149 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RN7SKP213-201ENST00000410746 298 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RPLP0P7-201ENST00000416050 667 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AF186996.5-201ENST00000418098 904 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC093162.1-201ENST00000419682 124 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RPS24P13-201ENST00000442520 397 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC073850.1-201ENST00000449243 255 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC005008.1-201ENST00000456151 612 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC090686.1-201ENST00000481577 749 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC135721.1-201ENST00000497954 479 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RNU6-470P-201ENST00000515954 104 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC124068.1-201ENST00000563131 678 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AL031320.1-201ENST00000604177 357 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 Z95327.2-201ENST00000414579 1873 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AL731532.2-201ENST00000623542 1953 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RNU6-99P-201ENST00000364721 107 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 Y_RNA.399-201ENST00000383955 105 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RNU6-128P-201ENST00000383976 107 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RNU6-1109P-201ENST00000391187 107 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AL078599.1-201ENST00000402075 293 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 DPPA2P3-201ENST00000411853 655 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 CALM2P2-201ENST00000428512 440 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC236972.1-201ENST00000433225 199 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 BTF3P6-201ENST00000448054 499 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC104472.2-201ENST00000469035 601 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RPS27AP1-201ENST00000475545 471 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RN7SL319P-201ENST00000480656 221 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 TBCAP3-201ENST00000512475 312 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 SNORA14.1-201ENST00000516113 141 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AP006245.2-201ENST00000522004 300 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 RANP3-201ENST00000530970 276 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC005868.1-201ENST00000536421 331 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC009570.1-201ENST00000609599 745 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 AC062037.2-201ENST00000610137 73 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 U2.17-201ENST00000611454 95 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 ATP5A1P2-202ENST00000616464 443 ntBASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.13□□□□□ -1.59
AP4E1Q9UPM8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AL583834.1-201ENST00000406943 343 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 CTSL3P-202ENST00000412179 788 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 PPIAP3-201ENST00000450588 505 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 RPS24P6-201ENST00000452670 400 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC117503.1-201ENST00000472241 394 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC092451.1-201ENST00000480211 153 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 RPL22P13-201ENST00000493291 347 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 CEACAMP10-202ENST00000495431 496 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 ENPP7P9-201ENST00000514456 627 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 RNU6-27P-201ENST00000516146 107 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 HMGN2P6-201ENST00000551091 273 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 OR7E18P-201ENST00000592589 702 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AL451044.1-201ENST00000604867 238 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AL365434.2-201ENST00000607979 234 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 SDR42E1P1-201ENST00000611327 477 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 EIF3FP1-201ENST00000613970 806 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AP002799.1-201ENST00000623552 423 ntBASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AP4E1Q9UPM8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms