Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AL645927.1-201ENST00000396783 406 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AL109755.1-201ENST00000401791 649 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AL109941.1-201ENST00000401925 229 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 SNORD97-201ENST00000459187 142 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 HMGB1P25-201ENST00000468402 607 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 HMGN1P28-201ENST00000521340 364 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC109635.4-202ENST00000531666 412 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC008033.2-201ENST00000542626 177 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 CR383656.7-201ENST00000548164 174 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 TVP23CP2-201ENST00000571473 623 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 POLR3GP2-201ENST00000588366 668 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 CTHRC1P1-201ENST00000605383 469 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC092807.2-201ENST00000609367 243 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AL390240.1-201ENST00000612950 384 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 EIF3FP1-201ENST00000613970 806 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AL353662.3-201ENST00000625131 237 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC134503.1-201ENST00000633048 54 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AC027287.1-201ENST00000553115 1453 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 AP001350.1-201ENST00000601906 1524 ntBASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.74□□□□□ -1.49
BRPF3Q9ULD4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 INTS6P1-201ENST00000504674 2530 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 MIR153-1-201ENST00000384914 90 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-821P-201ENST00000390995 107 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 OR2AM1P-201ENST00000422137 422 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AL645608.4-201ENST00000423619 154 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 HMGB3P11-201ENST00000440127 604 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-1208P-201ENST00000459588 107 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC093270.2-201ENST00000486157 792 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC083904.1-201ENST00000487828 231 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-1170P-201ENST00000515974 106 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-559P-201ENST00000516151 98 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-864P-201ENST00000516256 108 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 RNU6-1092P-201ENST00000516955 87 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 SNORA25.17-201ENST00000517184 124 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AP001804.3-201ENST00000525146 880 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AL049839.1-201ENST00000556151 657 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC044860.2-201ENST00000561005 179 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC013244.1-201ENST00000604279 193 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AL031176.1-201ENST00000604554 466 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 MIR7155-201ENST00000615925 56 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 MIR7154-201ENST00000620673 73 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 AC091905.4-201ENST00000623432 202 ntBASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.73□□□□□ -1.49
BRPF3Q9ULD4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC011266.1-201ENST00000624119 3569 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNU6-960P-201ENST00000364056 120 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNA5SP513-201ENST00000364648 118 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNU6-61P-201ENST00000365528 109 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 Y_RNA.378-201ENST00000365652 113 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 SNORA51.8-201ENST00000384234 132 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNU6-1297P-201ENST00000384415 104 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 UBE2V1P2-201ENST00000397758 440 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNA5SP39-201ENST00000411245 120 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 MTCO2P27-201ENST00000420740 428 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 PDSS1P1-201ENST00000422953 1114 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms