Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC007318.2-201ENST00000620999 243 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC090772.4-201ENST00000623599 362 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC231657.1-201ENST00000624313 397 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 CRYM-AS1-204ENST00000637983 556 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC096644.4-201ENST00000563417 2912 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 FAM35CP-201ENST00000554755 2470 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC007256.1-201ENST00000392253 2765 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 RNU6-621P-201ENST00000364752 109 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 Y_RNA.311-201ENST00000365068 96 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 SNORD116.1-201ENST00000365628 92 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 RNU6-851P-201ENST00000384565 107 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AL031679.1-201ENST00000400616 525 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 ATP5F1P1-201ENST00000433775 569 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC004866.2-201ENST00000438285 481 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 SDCBPP1-201ENST00000440192 890 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 RABEPKP1-201ENST00000440529 1026 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC025750.2-201ENST00000442609 450 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AL353691.1-201ENST00000451332 387 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC092754.2-201ENST00000463506 460 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC006499.2-201ENST00000513470 337 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 OR5G4P-201ENST00000525251 760 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC010198.2-201ENST00000550612 259 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AL391156.1-201ENST00000554965 554 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 BDH2P1-201ENST00000602288 736 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC144521.1-201ENST00000607148 956 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC106052.1-201ENST00000608029 497 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC106028.5-201ENST00000610332 395 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 MIR7106-201ENST00000612419 65 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC107075.1-201ENST00000613695 314 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AL110115.1-201ENST00000614396 364 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC022960.3-201ENST00000619794 441 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 AC110774.1-201ENST00000623567 2018 ntBASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCF1Q9UBD9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 ZNF29P-201ENST00000225587 168 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNU6-28P-201ENST00000362378 107 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNU6-7-201ENST00000364784 107 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNU6-8-201ENST00000365467 107 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNU6-636P-201ENST00000384598 107 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNA5SP274-201ENST00000410484 108 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 HMGB3P23-201ENST00000414981 585 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 YPEL5P1-201ENST00000419731 367 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RPL21P32-201ENST00000419877 477 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 BEND7P1-201ENST00000422058 457 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RPL23AP22-201ENST00000437556 453 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 MTCYBP34-201ENST00000439552 670 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RPL21P134-201ENST00000453468 483 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC097493.1-201ENST00000463958 372 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RPS23P3-201ENST00000470993 430 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 FAM172BP-201ENST00000487497 1089 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC119751.5-201ENST00000514077 770 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNA5SP385-201ENST00000515947 110 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 RNY4P37-201ENST00000516225 96 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 OR5AK1P-201ENST00000524837 922 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL132857.1-201ENST00000555180 708 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC090695.1-201ENST00000561269 1222 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 MTND1P8-201ENST00000571424 950 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC090615.1-201ENST00000577519 154 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC022662.1-201ENST00000580252 331 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 MTCO2P2-201ENST00000591258 225 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 DUXAP11-201ENST00000603858 526 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms