Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DEFB108D-201ENST00000527787 222 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC090888.1-201ENST00000561335 1141 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 MIR4325-201ENST00000583049 90 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 DUXAP3-201ENST00000603616 594 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AP003973.1-201ENST00000604639 691 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AL137843.1-201ENST00000605078 385 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AL161734.1-201ENST00000609720 557 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC090772.4-201ENST00000623599 362 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC103798.2-201ENST00000624292 632 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC068880.5-201ENST00000624331 290 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC012321.1-201ENST00000561622 1588 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RNU6-492P-201ENST00000363035 104 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RNA5SP171-201ENST00000391071 115 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC234781.2-201ENST00000426370 994 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 MTCYBP32-201ENST00000427945 1084 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 ARPC3P1-201ENST00000437218 533 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AL121871.1-201ENST00000443413 436 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AL353718.1-201ENST00000451028 517 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RPL37P25-201ENST00000507308 276 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC109464.2-201ENST00000510242 943 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC121161.1-201ENST00000510606 652 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC024224.1-201ENST00000538284 609 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 MIR3921-201ENST00000577308 85 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 RPL23AP92-201ENST00000603609 255 ntBASIC2.42□□□□□ -2.02
VAPAQ9P0L0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
VAPAQ9P0L0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AL589826.1-201ENST00000340697 249 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 MIR217-201ENST00000384817 110 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 MIR9-1-201ENST00000385198 89 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RNA5SP354-201ENST00000391247 136 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RNU2-43P-201ENST00000410306 190 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC080125.1-201ENST00000414888 684 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 BEND7P1-201ENST00000422058 457 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RPL7L1P10-201ENST00000427790 463 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 THAP5P1-201ENST00000439089 262 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 VN1R10P-201ENST00000447106 875 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 COX6CP18-201ENST00000448769 222 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC092757.1-201ENST00000467293 467 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RPS27P26-201ENST00000494583 239 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC113420.1-201ENST00000507903 571 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RNA5SP367-201ENST00000516557 118 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 RNU6-928P-201ENST00000516876 104 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 MTCYBP27-201ENST00000555160 670 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 ZNF971P-201ENST00000562068 1249 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 ACTR3BP3-201ENST00000565577 979 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC009163.5-201ENST00000575421 637 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC124283.4-201ENST00000581815 456 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AC105224.1-201ENST00000587055 421 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AL035413.2-201ENST00000604801 525 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AP000238.1-201ENST00000608759 426 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 AP005137.2-201ENST00000609238 400 ntBASIC2.41□□□□□ -2.02
VAPAQ9P0L0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
VAPAQ9P0L0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VAPAQ9P0L0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VAPAQ9P0L0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms