Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC025031.4-201ENST00000621248 3271 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MTND4P14-201ENST00000435799 1354 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MARK2P15-201ENST00000432204 2186 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 XIAPP3-201ENST00000312918 795 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 SNORA71.2-201ENST00000364941 134 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RNU6-641P-201ENST00000384006 107 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MIR153-1-201ENST00000384914 90 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RNA5SP107-201ENST00000411358 122 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RPS7P15-201ENST00000415804 584 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL391219.1-201ENST00000422570 483 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MTND1P14-201ENST00000427400 950 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RPL23AP25-201ENST00000430973 463 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC091685.2-201ENST00000454924 864 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RN7SL329P-201ENST00000467740 299 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC012158.1-204ENST00000483430 465 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RNU4-29P-201ENST00000515943 174 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 RNU6-64P-201ENST00000517119 105 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC051619.2-201ENST00000559063 397 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 BPIFA4P-203ENST00000603168 689 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.6-201ENST00000603753 252 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.11-201ENST00000604059 253 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC008162.1-201ENST00000604718 254 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.1-201ENST00000604752 252 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.5-201ENST00000605253 252 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.12-201ENST00000605291 253 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.8-201ENST00000605353 252 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AL670379.7-201ENST00000605823 252 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC093913.1-201ENST00000614178 329 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 U6.114-201ENST00000636407 96 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 AC108467.2-201ENST00000617640 1597 ntBASIC4.05□□□□□ -1.76
VSX1Q9NZR4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX1Q9NZR4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 GABPAP-201ENST00000419271 1356 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 CPHL1P-201ENST00000461341 3407 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 BDP1P-201ENST00000582658 1990 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 RNU6-179P-201ENST00000363350 107 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 SNORA51.2-201ENST00000364595 132 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 Y_RNA.509-201ENST00000384506 99 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 SNORD37.1-201ENST00000390968 65 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 HDGFP1-201ENST00000405943 252 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 AL162578.1-201ENST00000406202 378 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 EIF4EP1-201ENST00000422311 642 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 MTATP6P16-201ENST00000434543 526 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX1Q9NZR4 RPS3AP41-201ENST00000462701 778 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 MRPS17P3-201ENST00000465453 385 ntBASIC4.04□□□□□ -1.76
VSX1Q9NZR4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms