Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC097714.1-201ENST00000511272 1647 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC008568.2-201ENST00000623862 2313 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 MTCO1P56-201ENST00000401674 224 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 GTF2IP7-202ENST00000436677 309 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 YWHAZP7-201ENST00000436906 631 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 LSM1P1-201ENST00000438629 273 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC005297.2-201ENST00000450430 606 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC023424.2-201ENST00000493479 777 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC113420.1-201ENST00000507903 571 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 HSPA8P13-201ENST00000523715 472 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 OR4K8P-201ENST00000578842 1048 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 LARP7P3-201ENST00000579888 337 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC105224.1-201ENST00000587055 421 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AL137843.1-201ENST00000605078 385 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 RPL23AP88-201ENST00000605759 454 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC080013.4-201ENST00000607624 649 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC124016.2-201ENST00000610058 665 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC027309.3-201ENST00000623419 351 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC120349.2-201ENST00000625002 298 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 MIR1322-201ENST00000638013 71 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC008264.2-201ENST00000610193 3731 ntBASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KLHL28Q9NXS3 AC009487.2-201ENST00000420969 6821 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC087359.1-201ENST00000508335 1740 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC107982.1-201ENST00000507171 1300 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 SNORD67-201ENST00000390833 111 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AL356320.2-201ENST00000417263 507 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 USP9YP21-201ENST00000420603 432 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC092573.2-201ENST00000434546 243 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 RPL31P60-201ENST00000478450 367 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 RPS3AP14-201ENST00000483907 780 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC090453.1-201ENST00000495560 436 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 PRELID3BP6-201ENST00000503839 571 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC109464.2-201ENST00000510242 943 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AL359273.1-201ENST00000510918 627 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC119751.5-201ENST00000514077 770 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 CASP1P1-201ENST00000526345 212 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 EIF4BP1-201ENST00000554881 351 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC126365.2-201ENST00000580630 379 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 UBL5P2-201ENST00000583788 219 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC006116.7-201ENST00000590141 756 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC006539.2-201ENST00000601729 572 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 DUXAP11-201ENST00000603858 526 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC100793.4-201ENST00000613683 429 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AL512427.1-201ENST00000618593 349 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC084824.4-201ENST00000620106 731 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC011330.2-201ENST00000621680 635 ntBASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KLHL28Q9NXS3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms