Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RNU6-306P-201ENST00000384617 107 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 Y_RNA.556-201ENST00000384677 113 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RNU6-823P-201ENST00000391042 103 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 RNU2-3P-201ENST00000410144 191 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 Z99755.1-201ENST00000414048 380 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC092447.6-201ENST00000414578 210 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RPL21P109-201ENST00000422213 475 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 EIF4EP1-201ENST00000422311 642 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC104564.1-201ENST00000493028 407 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 PGAM1P13-201ENST00000507497 754 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 NDUFB5P1-201ENST00000508134 564 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RN7SKP277-201ENST00000516895 283 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 GNAI2P1-201ENST00000541815 315 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 GSTP1P1-201ENST00000548078 319 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 CR383656.7-201ENST00000548164 174 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RPL21P7-201ENST00000557463 483 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RN7SL52P-201ENST00000584271 284 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC005357.1-201ENST00000588399 301 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC069307.1-201ENST00000602820 447 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 RN7SL787P-201ENST00000613000 284 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC110801.1-201ENST00000623590 212 ntBASIC4.95□□□□□ -1.62
SSU72Q9NP77 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SSU72Q9NP77 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSU72Q9NP77 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSU72Q9NP77 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC007529.1-201ENST00000418574 2178 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 RNU6-1059P-201ENST00000363752 98 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 Y_RNA.257-201ENST00000364596 102 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 Y_RNA.389-201ENST00000383924 113 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 RNU6-434P-201ENST00000384376 107 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 RNU2-50P-201ENST00000410494 143 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 SDHDP6-201ENST00000414693 480 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 RPS12P5-201ENST00000423449 371 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 PSMA2P3-201ENST00000429685 675 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 MTCO3P45-201ENST00000443036 613 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AL354714.3-201ENST00000447284 493 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AL162389.1-201ENST00000449233 177 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 IGHV5-78-201ENST00000450948 295 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 BX276092.4-201ENST00000452056 248 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC008481.1-201ENST00000463278 396 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC100832.1-201ENST00000471945 383 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 RPL22P13-201ENST00000493291 347 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC006499.3-201ENST00000506077 748 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 SNORD116.3-201ENST00000517176 78 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 RNU6-323P-201ENST00000521915 107 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC126177.5-201ENST00000549599 178 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC062037.2-201ENST00000610137 73 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 U2.1-201ENST00000618978 145 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 MIR8080-201ENST00000622224 89 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC067931.1-201ENST00000624190 671 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AL596275.2-204ENST00000641628 552 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AL596275.2-206ENST00000641957 626 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC020633.1-201ENST00000468439 2247 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 AL137003.2-201ENST00000606924 2538 ntBASIC4.94□□□□□ -1.62
SSU72Q9NP77 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
SSU72Q9NP77 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSU72Q9NP77 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 SNORD62.1-201ENST00000362541 86 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms