Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 SDR42E1P3-201ENST00000438345 502 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 CALM1P1-201ENST00000442082 433 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 SNORD21-201ENST00000383953 95 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 HMGB3P21-201ENST00000452483 547 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 RNA5SP330-201ENST00000517096 96 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC013444.2-201ENST00000603317 787 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 VN1R74P-201ENST00000613259 503 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 MTCO1P7-201ENST00000419523 1542 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 AC091152.2-201ENST00000591628 2569 ntBASIC1.63□□□□□ -2.15
CHD8Q9HCK8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
CHD8Q9HCK8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 MTCO3P31-201ENST00000405526 789 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 MIR1183-201ENST00000408856 89 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 GOLGA5P1-201ENST00000507317 980 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC091515.1-201ENST00000548110 679 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 ARL5AP3-201ENST00000439327 386 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 SNRPFP3-201ENST00000457792 225 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 RPS26P24-201ENST00000497656 331 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 RNA5SP76-201ENST00000516277 87 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 COX6CP5-201ENST00000527162 228 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 RFPL1S-203ENST00000539579 330 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC023825.1-201ENST00000566704 1030 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AC112191.3-201ENST00000604371 277 ntBASIC1.62□□□□□ -2.15
CHD8Q9HCK8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD8Q9HCK8 AL121972.1-201ENST00000402023 252 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 HMGB1P26-201ENST00000452520 628 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 SEPT7P3-201ENST00000455017 621 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AC092989.1-201ENST00000481235 277 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.61□□□□□ -2.15
CHD8Q9HCK8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AC104581.2-201ENST00000572227 430 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 MIR4644-201ENST00000579929 84 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 MKKS-204ENST00000639674 192 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 ZNF876P-202ENST00000398732 1485 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 ZNF355P-201ENST00000427301 3216 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CHD8Q9HCK8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.61□□□□□ -2.15
CHD8Q9HCK8 HMGB3P2-201ENST00000411913 584 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.61□□□□□ -2.15
CHD8Q9HCK8 RPS15AP36-201ENST00000492022 382 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 AP000254.1-201ENST00000609934 520 ntBASIC1.61□□□□□ -2.15
CHD8Q9HCK8 SNRPEP3-201ENST00000338402 276 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 Y_RNA.258-201ENST00000364613 105 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 PAICSP7-201ENST00000419829 962 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 RPL27AP8-201ENST00000424277 446 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AC244505.4-201ENST00000434905 287 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 SSXP5-201ENST00000443473 287 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AC022447.3-201ENST00000506865 495 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AC015720.1-201ENST00000565251 277 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 MIR5002-201ENST00000584713 97 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 MIR3074-201ENST00000384885 81 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AL445687.1-201ENST00000439946 251 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 USP9YP8-201ENST00000441913 500 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 AL133412.1-201ENST00000380194 2992 ntBASIC1.6□□□□□ -2.15
CHD8Q9HCK8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CHD8Q9HCK8 TOMM22P1-201ENST00000418578 312 ntBASIC1.59□□□□□ -2.15
CHD8Q9HCK8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.59□□□□□ -2.15
CHD8Q9HCK8 NPM1P52-201ENST00000518264 846 ntBASIC1.59□□□□□ -2.15
CHD8Q9HCK8 CBX3P5-201ENST00000552017 521 ntBASIC1.59□□□□□ -2.15
CHD8Q9HCK8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHD8Q9HCK8 AL132857.1-201ENST00000555180 708 ntBASIC1.59□□□□□ -2.15
CHD8Q9HCK8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.59□□□□□ -2.15
CHD8Q9HCK8 AC023043.3-201ENST00000593113 385 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms