Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 OR4R1P-201ENST00000529879 463 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC125611.2-201ENST00000551907 647 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL157687.1-201ENST00000554853 619 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL359212.1-201ENST00000556608 614 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 TVP23BP1-201ENST00000557500 617 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC068135.2-201ENST00000569293 1028 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC006504.3-201ENST00000586818 523 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 GLUD1P4-201ENST00000590914 418 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC103710.2-201ENST00000609912 942 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 TUG1_2.1-201ENST00000614234 87 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC139713.2-214ENST00000642059 1811 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 RNU6-1120P-201ENST00000362988 108 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 RNY4P14-201ENST00000363656 96 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 RNU6-780P-201ENST00000391030 104 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 RNU4-25P-201ENST00000410569 230 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 EI24P1-201ENST00000416584 867 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 MTND4LP11-201ENST00000422184 280 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 MTND1P2-201ENST00000430604 821 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC000111.3-201ENST00000433478 193 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC027673.1-201ENST00000456245 405 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AP000926.1-201ENST00000479573 241 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC092989.1-201ENST00000481235 277 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC025554.1-201ENST00000505641 188 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 RNA5SP49-201ENST00000516450 115 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.693-201ENST00000516641 110 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 FAM60DP-201ENST00000524174 632 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC109635.3-201ENST00000529536 185 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC007424.1-203ENST00000554613 687 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 MIR4330-201ENST00000579077 105 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AL022099.1-201ENST00000604551 712 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AC008536.2-201ENST00000607284 349 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 MAPK10-253ENST00000641010 4072 ntBASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM54Q9BYV2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RNU6-511P-201ENST00000363496 107 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AL136372.1-201ENST00000403060 228 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RPL7AP73-201ENST00000413490 353 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AL807761.1-201ENST00000417622 171 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 USP9YP27-201ENST00000418455 438 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 FTH1P6-201ENST00000430768 320 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 RPL23AP30-201ENST00000432419 501 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AC006480.1-201ENST00000449887 378 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 HMGB3P30-201ENST00000457863 606 ntBASIC4.12□□□□□ -1.75
TRIM54Q9BYV2 AC008481.1-201ENST00000463278 396 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms