Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 MIR607-201ENST00000385241 96 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 RNU6-754P-201ENST00000391166 107 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 RN7SKP177-201ENST00000410567 355 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 PGBD4P3-201ENST00000440731 581 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC244505.5-201ENST00000443639 207 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC010285.1-201ENST00000470580 392 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 RPL31P13-201ENST00000484151 370 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 MLLT10P2-201ENST00000506434 249 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 GMPSP1-201ENST00000514075 579 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 RNU6-798P-201ENST00000516912 103 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AGGF1P4-201ENST00000568249 801 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 KC877982.1-201ENST00000602313 470 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AP001429.1-201ENST00000602568 530 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC007038.2-201ENST00000608095 740 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AC015540.1-201ENST00000615828 501 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL359740.1-201ENST00000624340 592 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 DDX10P1-201ENST00000448545 1933 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 AL138713.1-201ENST00000624026 2130 ntBASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.61□□□□□ -1.67
RTFDC1Q9BY42 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 GNG5P1-201ENST00000255500 204 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 Y_RNA.359-201ENST00000365498 102 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 RNU6-248P-201ENST00000410720 107 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 Z92545.1-201ENST00000411782 234 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 RAC1P3-201ENST00000416129 580 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC137499.1-201ENST00000427602 88 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC093156.1-201ENST00000440382 670 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 CYCSP32-201ENST00000440548 321 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 ATP5C1P1-201ENST00000441945 895 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 RBMY2UP-201ENST00000453474 324 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 KLF3P2-201ENST00000465138 268 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 RPL31P61-201ENST00000496160 376 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 NDUFB4P2-201ENST00000509515 391 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 MTCYBP20-201ENST00000524239 1129 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 RPL21P12-201ENST00000559810 515 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC025946.2-201ENST00000603398 234 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC090578.1-201ENST00000604955 591 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC005000.2-201ENST00000605468 310 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC006566.1-201ENST00000608943 513 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL355472.4-201ENST00000610233 626 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AL589743.7-201ENST00000612637 233 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC079684.1-201ENST00000621405 437 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 AC055839.1-201ENST00000634467 498 ntBASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RTFDC1Q9BY42 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 SNORA31-201ENST00000362607 130 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 RNU5A-6P-201ENST00000384136 116 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 RNU6-882P-201ENST00000391025 103 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 OR4K11P-201ENST00000431829 904 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AC004866.2-201ENST00000438285 481 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 TPT1P14-201ENST00000448018 505 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 MTND1P12-201ENST00000455231 147 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 MTCO2P29-201ENST00000465212 189 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AP000926.1-201ENST00000479573 241 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 VN1R104P-201ENST00000505115 1009 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AC021146.1-201ENST00000511202 716 ntBASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.59□□□□□ -1.67
RTFDC1Q9BY42 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms