Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC004241.3-201ENST00000611728 517 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 AC140725.3-201ENST00000616193 880 ntBASIC2.66□□□□□ -1.98
SCAPERQ9BY12 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.66□□□□□ -1.98
SCAPERQ9BY12 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SCAPERQ9BY12 ANAPC10P1-201ENST00000395991 556 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AC004965.1-201ENST00000413033 213 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 VN1R96P-201ENST00000446052 858 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 BX322784.1-201ENST00000455793 1077 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.65□□□□□ -1.99
SCAPERQ9BY12 MTCYBP17-201ENST00000503579 789 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.65□□□□□ -1.99
SCAPERQ9BY12 CBX3P4-201ENST00000538909 354 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AC002984.1-201ENST00000591692 448 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 MIR502-201ENST00000606349 86 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AC092954.1-201ENST00000609121 445 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 AC026241.1-201ENST00000517873 2142 ntBASIC2.65□□□□□ -1.99
SCAPERQ9BY12 RNA5SP138-201ENST00000365098 114 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC240504.1-201ENST00000395709 845 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.64□□□□□ -1.99
SCAPERQ9BY12 SSXP1-201ENST00000453640 473 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC090453.1-201ENST00000495560 436 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC025755.1-201ENST00000521306 278 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC104115.2-201ENST00000523026 687 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 OR4P1P-201ENST00000530808 1136 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.64□□□□□ -1.99
SCAPERQ9BY12 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SCAPERQ9BY12 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.64□□□□□ -1.99
SCAPERQ9BY12 MIR4448-201ENST00000584360 86 ntBASIC2.64□□□□□ -1.99
SCAPERQ9BY12 HSPE1P11-201ENST00000339579 310 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 Y_RNA.224-201ENST00000364308 111 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AL645568.3-201ENST00000433683 316 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 RPS7P2-201ENST00000435134 607 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 DNAJC19P4-201ENST00000440115 345 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 SNORD108-201ENST00000459332 71 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AL121839.1-201ENST00000556233 1185 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AL645939.4-201ENST00000604495 135 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 AC093536.2-201ENST00000565257 1406 ntBASIC2.63□□□□□ -1.99
SCAPERQ9BY12 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
SCAPERQ9BY12 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
SCAPERQ9BY12 AC087441.2-201ENST00000529141 262 ntBASIC2.62□□□□□ -1.99
SCAPERQ9BY12 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 HSPE1P14-201ENST00000605812 302 ntBASIC2.62□□□□□ -1.99
SCAPERQ9BY12 AL157700.1-201ENST00000561973 1432 ntBASIC2.62□□□□□ -1.99
SCAPERQ9BY12 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SCAPERQ9BY12 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC013404.1-201ENST00000413068 249 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 USP9YP6-201ENST00000413550 854 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 HMGN2P38-201ENST00000423806 265 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.61□□□□□ -1.99
SCAPERQ9BY12 HSFY3P-201ENST00000444242 1191 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 USP9YP34-201ENST00000453983 808 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.61□□□□□ -1.99
SCAPERQ9BY12 RNU1-40P-201ENST00000516816 164 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 RNU1-97P-201ENST00000516872 164 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC103987.3-201ENST00000582071 292 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 AC019159.1-201ENST00000605094 187 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 HPVC1-201ENST00000629899 1198 ntBASIC2.61□□□□□ -1.99
SCAPERQ9BY12 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 Y_RNA.540-201ENST00000384638 111 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 MOB1AP2-201ENST00000446060 614 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC109471.1-201ENST00000511631 612 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 NOP56P3-201ENST00000549457 385 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 ARL2BPP2-201ENST00000550907 489 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC013444.2-201ENST00000603317 787 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 AC012360.2-201ENST00000609349 391 ntBASIC2.6□□□□□ -1.99
SCAPERQ9BY12 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.6□□□□□ -1.99
SCAPERQ9BY12 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SCAPERQ9BY12 RNA5SP27-201ENST00000363839 119 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 Y_RNA.327-201ENST00000365201 102 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.59□□□□□ -1.99
SCAPERQ9BY12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AC010625.1-201ENST00000511296 403 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms