Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MUPP-201ENST00000438111 566 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC127537.2-201ENST00000439258 465 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MTND3P7-201ENST00000474435 343 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MTCO3P44-201ENST00000510977 541 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MTCYBP43-201ENST00000513621 740 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC053481.3-201ENST00000577881 843 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 PIGPP4-201ENST00000584447 307 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC112230.1-201ENST00000604342 547 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC105129.3-201ENST00000605455 485 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 HMGN2P28-201ENST00000606102 262 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-433P-201ENST00000363216 104 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-374P-201ENST00000364146 108 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 MT-TC-201ENST00000387405 66 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 MIR937-201ENST00000401271 86 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL355379.1-201ENST00000405542 640 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 RPL7P2-201ENST00000427639 268 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 SAR1AP4-201ENST00000429225 591 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 UBE2D3P4-201ENST00000441973 436 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 EEF1E1P1-201ENST00000446998 430 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC093809.1-201ENST00000509155 340 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 IGKV2D-36-201ENST00000518643 226 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AP003385.6-201ENST00000531603 374 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC068587.4-201ENST00000533893 186 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC110760.3-201ENST00000598794 467 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC010620.1-201ENST00000601088 1102 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL390240.1-201ENST00000612950 384 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 MIR7844-201ENST00000616161 122 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AL445264.1-201ENST00000621719 171 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC004009.2-201ENST00000623016 728 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC009039.2-201ENST00000624524 529 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 AC006927.3-201ENST00000638789 384 ntBASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC28BQ9BUN5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-952P-201ENST00000391164 108 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL031679.1-201ENST00000400616 525 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL354719.1-201ENST00000406535 843 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-920P-201ENST00000410926 92 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL807761.1-201ENST00000417622 171 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL365338.1-201ENST00000422282 858 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RSL24D1P6-201ENST00000426934 401 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 EZH2P1-201ENST00000431167 291 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 MTND5P14-201ENST00000441481 1267 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 KATNBL1P3-201ENST00000443475 909 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms