Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 RNA5SP283-201ENST00000365604 119 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 Y_RNA.608-201ENST00000410647 95 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 RNU2-62P-201ENST00000410868 191 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 RN7SKP140-201ENST00000411196 284 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 ELOCP17-201ENST00000414751 326 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AL356583.2-201ENST00000426536 280 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 ISCA1P2-201ENST00000438679 421 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 TRIM60P18-201ENST00000441518 828 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 SNRPFP4-201ENST00000456366 242 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC084357.1-201ENST00000473404 255 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 OR5BM1P-201ENST00000512021 366 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 FTH1P21-201ENST00000512179 511 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 Y_RNA.688-201ENST00000516565 95 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 IGKV2-23-201ENST00000518729 323 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC093012.1-202ENST00000549403 582 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 U73023.1-201ENST00000603134 700 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC104010.1-201ENST00000616889 150 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC009878.1-201ENST00000621819 340 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 AC118273.1-201ENST00000525324 3006 ntBASIC4□□□□□ -1.77
HERPUD2Q9BSE4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HERPUD2Q9BSE4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 FAM35BP-202ENST00000497389 3337 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 RNU1-64P-201ENST00000365443 163 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 HLFP1-201ENST00000402375 499 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AL445189.1-201ENST00000405722 338 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 Y_RNA.598-201ENST00000410480 95 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 USP9YP13-201ENST00000417797 480 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 CYCSP46-201ENST00000423569 204 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 BX890604.2-201ENST00000427883 474 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AL590664.1-201ENST00000448065 339 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 RPS27AP8-201ENST00000452665 445 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 RPL30P5-201ENST00000494923 336 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 RNU6-64P-201ENST00000517119 105 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC022878.1-201ENST00000530684 149 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AL163153.1-201ENST00000554223 283 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 MIR548AB-201ENST00000584917 84 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC002545.1-201ENST00000592511 181 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC112191.3-201ENST00000604371 277 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 OR2AS2P-201ENST00000606902 342 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC090132.2-201ENST00000615881 347 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 SNHG22-203ENST00000617833 660 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC068057.2-201ENST00000624047 895 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AC091905.1-201ENST00000624400 311 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AL136313.1-201ENST00000624804 202 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.99□□□□□ -1.77
HERPUD2Q9BSE4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 RNU4-21P-201ENST00000362802 126 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 MRPL42P2-201ENST00000403169 426 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 TAAR7P-201ENST00000436141 242 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms