Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC006960.3-201ENST00000561845 705 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 OR4K8P-201ENST00000578842 1048 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 COX6CP3-201ENST00000580869 223 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 SNORD84-203ENST00000584275 78 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC245014.2-201ENST00000603689 287 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC246785.4-201ENST00000605374 287 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC007038.2-201ENST00000608095 740 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC004908.2-201ENST00000609090 574 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC019176.2-201ENST00000611579 315 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC091304.9-201ENST00000612091 226 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC009268.2-201ENST00000621925 457 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL732618.1-201ENST00000623251 301 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RNY1P12-201ENST00000364251 105 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RNY4P16-201ENST00000364768 94 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 EIF4EP1-201ENST00000422311 642 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC019097.1-201ENST00000424783 735 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL358934.1-201ENST00000432346 324 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 FTH1P1-201ENST00000437933 532 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 TPT1P14-201ENST00000448018 505 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL162388.1-201ENST00000450912 352 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RN7SL293P-201ENST00000481765 281 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC010587.1-201ENST00000505809 469 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MIR3146-201ENST00000580367 79 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MIR3944-201ENST00000581277 108 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MIR3118-1-201ENST00000581787 76 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 KC877982.1-201ENST00000602313 470 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL022154.1-201ENST00000604698 785 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MIR98-201ENST00000606724 119 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AC091953.2-201ENST00000623979 160 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 U6.105-201ENST00000637379 88 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 MAPK10-253ENST00000641010 4072 ntBASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PAAF1Q9BRP4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RN7SKP226-201ENST00000364912 300 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RNU6-432P-201ENST00000384196 109 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RPL23AP32-201ENST00000395315 459 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 MTCO3P12-201ENST00000416718 547 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 OR1AA1P-201ENST00000419597 916 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RPL31P35-201ENST00000431058 377 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 PRDX3P3-201ENST00000447765 522 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC108059.3-201ENST00000456388 214 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC022795.1-201ENST00000473808 480 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RBM43P1-201ENST00000476891 1081 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC093278.1-201ENST00000494700 600 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 RNU6-506P-201ENST00000516553 94 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 Vault.3-201ENST00000516676 95 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 SNORA70.18-201ENST00000516696 98 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC107934.1-201ENST00000522215 217 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms