Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC016727.2-201ENST00000603988 621 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL12A1Q99715 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
COL12A1Q99715 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
COL12A1Q99715 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
COL12A1Q99715 XKRYP4-201ENST00000414395 483 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 MTCO3P30-201ENST00000426425 670 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 XKRYP5-201ENST00000449659 483 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 MTND5P7-201ENST00000413558 1798 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
COL12A1Q99715 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 RNU6-984P-201ENST00000363236 109 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 Y_RNA.115-201ENST00000363272 98 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.42□□□□□ -2.18
COL12A1Q99715 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL12A1Q99715 RPS3AP23-202ENST00000574601 686 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.42□□□□□ -2.18
COL12A1Q99715 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL12A1Q99715 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 RNA5SP160-201ENST00000364866 120 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.41□□□□□ -2.18
COL12A1Q99715 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL12A1Q99715 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.41□□□□□ -2.18
COL12A1Q99715 AL162388.1-201ENST00000450912 352 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC091544.1-201ENST00000484702 348 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 MTCYBP19-201ENST00000517463 1124 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC090751.1-201ENST00000566966 267 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC068135.2-201ENST00000569293 1028 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 MIR4506-201ENST00000584693 77 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.41□□□□□ -2.18
COL12A1Q99715 AC096772.1-201ENST00000609146 564 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 VIS1.1-201ENST00000610517 203 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL12A1Q99715 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL12A1Q99715 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AP002345.1-201ENST00000456493 928 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 COX6CP14-201ENST00000469580 174 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.41□□□□□ -2.18
COL12A1Q99715 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
COL12A1Q99715 AP000553.5-201ENST00000641933 54 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL12A1Q99715 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.41□□□□□ -2.18
COL12A1Q99715 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 RPS6P12-201ENST00000432491 726 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.41□□□□□ -2.18
COL12A1Q99715 AC034268.2-201ENST00000571784 482 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC099778.2-201ENST00000610904 211 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC098679.5-201ENST00000624394 571 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 AC092159.4-201ENST00000624944 550 ntBASIC1.41□□□□□ -2.18
COL12A1Q99715 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
COL12A1Q99715 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.4□□□□□ -2.18
COL12A1Q99715 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
COL12A1Q99715 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
COL12A1Q99715 RNU6-882P-201ENST00000391025 103 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 THAP5P1-201ENST00000439089 262 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL12A1Q99715 RPS3AP22-201ENST00000488297 769 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 HMGB1P47-201ENST00000511281 589 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AP000907.2-201ENST00000530827 353 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.4□□□□□ -2.19
COL12A1Q99715 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.4□□□□□ -2.19
COL12A1Q99715 AC124283.4-201ENST00000581815 456 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 MIR6788-201ENST00000618842 66 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.4□□□□□ -2.19
COL12A1Q99715 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.4□□□□□ -2.19
COL12A1Q99715 MTCO1P14-201ENST00000441695 1559 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL12A1Q99715 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL12A1Q99715 BTBD10P2-201ENST00000404779 676 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AC093084.1-201ENST00000424233 687 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AL590664.1-201ENST00000448065 339 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.4□□□□□ -2.19
COL12A1Q99715 AC022790.1-201ENST00000522872 204 ntBASIC1.4□□□□□ -2.19
COL12A1Q99715 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.4□□□□□ -2.19
COL12A1Q99715 MTND4P13-201ENST00000402078 1023 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.39□□□□□ -2.19
COL12A1Q99715 RPL21P2-201ENST00000440049 481 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.39□□□□□ -2.19
COL12A1Q99715 STMN1P1-201ENST00000617809 440 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AC012150.2-201ENST00000621300 544 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
COL12A1Q99715 RNA5SP62-201ENST00000363457 110 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
COL12A1Q99715 RNA5SP181-201ENST00000410246 98 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.39□□□□□ -2.19
COL12A1Q99715 AC005534.2-201ENST00000431047 433 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 snoU13.3-201ENST00000459441 104 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AC104435.1-201ENST00000483483 166 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms