Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC107982.1-201ENST00000507171 1300 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC107027.3-201ENST00000565095 3473 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AL049555.1-201ENST00000562834 1933 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 ZNF37BP-203ENST00000452306 1352 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 Y_RNA.70-201ENST00000362886 110 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 RNU6-1066P-201ENST00000363573 105 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 SNORD116-23-201ENST00000384645 92 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 RPS3AP24-201ENST00000407896 734 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AC109780.2-201ENST00000413467 845 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 USP9YP6-201ENST00000413550 854 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 RPL31P12-201ENST00000422587 358 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 SNRPEP8-201ENST00000442866 260 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AC016696.1-201ENST00000446949 318 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 PAXBP1P1-201ENST00000449315 447 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 USP9YP34-201ENST00000453983 808 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AP000797.1-201ENST00000478870 387 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AC004924.1-201ENST00000480160 781 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 FAM92A1P2-202ENST00000504766 877 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 HMGB1P28-201ENST00000507778 552 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AC116347.2-201ENST00000514912 523 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 RN7SKP298-201ENST00000515950 94 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AP001189.2-201ENST00000527320 189 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 DEFB108A-201ENST00000530110 222 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.91□□□□□ -1.78
MEIS3Q99687 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 AC091488.1-201ENST00000604239 660 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AL161756.2-201ENST00000604597 246 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 TUG1_1.1-201ENST00000610654 145 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 AC005332.6-201ENST00000613178 446 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 MKKS-204ENST00000639674 192 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MEIS3Q99687 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.91□□□□□ -1.78
MEIS3Q99687 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
MEIS3Q99687 OR5BR1P-201ENST00000524992 1330 ntBASIC3.91□□□□□ -1.78
MEIS3Q99687 ELL2P4-201ENST00000446870 1376 ntBASIC3.9□□□□□ -1.78
MEIS3Q99687 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MEIS3Q99687 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
MEIS3Q99687 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
MEIS3Q99687 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
MEIS3Q99687 OR1S2-201ENST00000302592 978 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
MEIS3Q99687 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MEIS3Q99687 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC073325.2-201ENST00000339545 159 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RNU4-91P-201ENST00000364778 135 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RNU4-12P-201ENST00000365233 139 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 Y_RNA.372-201ENST00000365599 102 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MEIS3Q99687 RPL17P50-201ENST00000396131 546 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 HMGB3P23-201ENST00000414981 585 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC009302.1-201ENST00000417147 390 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 OFD1P18Y-201ENST00000420889 959 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AL109913.1-201ENST00000421173 514 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.9□□□□□ -1.79
MEIS3Q99687 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AL513175.1-201ENST00000431492 780 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC105402.2-201ENST00000438503 358 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC127537.2-201ENST00000439258 465 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RPS7P5-201ENST00000441482 581 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RAB11AP1-201ENST00000442978 646 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC244505.5-201ENST00000443639 207 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 WASF1P1-201ENST00000447560 1131 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AL034418.1-201ENST00000448675 860 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.9□□□□□ -1.79
MEIS3Q99687 FGF7P6-202ENST00000451282 293 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC098799.2-201ENST00000509466 868 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 RNU6-507P-201ENST00000516045 100 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RNA5SP135-201ENST00000517019 125 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AP004247.1-201ENST00000531556 1289 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms