Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPL21P65-201ENST00000406094 466 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL590632.1-201ENST00000424289 371 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC093151.1-201ENST00000427711 313 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC097713.2-201ENST00000430199 356 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC007563.3-201ENST00000433233 371 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 BX679664.1-201ENST00000434429 253 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL450263.2-201ENST00000439400 589 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC023512.1-201ENST00000444513 499 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC140076.1-201ENST00000449897 361 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPL9P6-201ENST00000492764 598 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL358832.1-201ENST00000497800 389 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC022493.2-201ENST00000506122 481 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AP002770.2-201ENST00000543613 532 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC093519.1-201ENST00000566109 298 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 HMGB2P1-201ENST00000591146 634 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 VN1R88P-201ENST00000596787 292 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL110115.1-201ENST00000614396 364 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AP003972.1-201ENST00000625192 5446 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.107-201ENST00000363190 121 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.577-201ENST00000384794 101 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MIR613-201ENST00000385248 95 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC093719.1-202ENST00000392735 373 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL583834.1-201ENST00000406943 343 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPL31P52-201ENST00000407532 367 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPS23P10-201ENST00000416185 486 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 DPPA2P2-201ENST00000418220 897 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MTCYBP10-201ENST00000424905 650 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 Z93242.1-201ENST00000427102 353 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL139132.1-201ENST00000431587 344 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 IFNA20P-201ENST00000436840 528 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LSM1P1-201ENST00000438629 273 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC099563.1-201ENST00000456086 418 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 KCTD9P2-201ENST00000512203 1013 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RN7SKP244-201ENST00000516513 307 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC125611.2-201ENST00000551907 647 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 GTF2IP22-201ENST00000554443 182 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MIR5685-201ENST00000579080 79 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC091304.9-201ENST00000612091 226 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 TCL6_3.1-201ENST00000619064 137 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC068880.4-201ENST00000623082 495 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AL022322.2-201ENST00000624072 20397 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC009779.8-201ENST00000641684 4384 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC015813.6-201ENST00000624409 5808 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 OR5J1P-201ENST00000313544 939 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 U3.6-201ENST00000363622 211 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RNU6-409P-201ENST00000384114 104 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RNU6-533P-201ENST00000384144 107 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RNU6-432P-201ENST00000384196 109 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RNU6-1215P-201ENST00000384441 102 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RNU6-441P-201ENST00000384545 106 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMCN1Q96RW7 MRPS36P1-201ENST00000421291 307 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 RPL23AP69-201ENST00000431134 458 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC020550.1-201ENST00000447385 163 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 U8.21-201ENST00000459536 136 ntBASIC1.43□□□□□ -2.18
HMCN1Q96RW7 AC092754.1-201ENST00000472975 479 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms