Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ABCF2P2-201ENST00000450549 296 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC022364.2-201ENST00000457963 554 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 MTCO2P29-201ENST00000465212 189 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC020593.1-201ENST00000507399 299 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC017037.1-201ENST00000508460 471 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC114786.4-201ENST00000508771 728 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC090572.1-201ENST00000519251 160 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AL109766.1-201ENST00000555080 552 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 FGF7P1-201ENST00000582820 288 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 KC877982.1-201ENST00000602313 470 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 YWHAEP7-203ENST00000622054 312 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AC139713.2-214ENST00000642059 1811 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX18Q96RF0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX18Q96RF0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX18Q96RF0 AL139811.1-201ENST00000424779 2299 ntBASIC3.95□□□□□ -1.78
SNX18Q96RF0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 RNU6-1120P-201ENST00000362988 108 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 RNY3P13-201ENST00000365542 102 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 MIR3065-201ENST00000390137 79 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 U3.22-201ENST00000391120 215 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 HMGN1P24-201ENST00000412282 298 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 RPS23P10-201ENST00000416185 486 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 UQCRBP1-201ENST00000421129 336 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 CHIAP3-201ENST00000423668 1133 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 RPS12P10-201ENST00000427031 377 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC114755.5-201ENST00000447760 831 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 TPT1P14-201ENST00000448018 505 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 MTND1P9-201ENST00000453775 944 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 RPS23P7-201ENST00000466210 444 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 HMGB1P25-201ENST00000468402 607 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AP000852.1-201ENST00000472460 573 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC083798.1-201ENST00000472671 131 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 SCARNA24.1-201ENST00000516465 137 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 PARP1P2-201ENST00000556806 195 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 COX6CP3-201ENST00000580869 223 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC069061.3-201ENST00000582254 823 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 UBE2V2P2-201ENST00000587677 504 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC099669.2-201ENST00000616549 437 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 U73479.1-201ENST00000618062 168 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 AC019278.1-201ENST00000623516 479 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 ZNF962P-201ENST00000443465 3140 ntBASIC3.94□□□□□ -1.78
SNX18Q96RF0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SNX18Q96RF0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX18Q96RF0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX18Q96RF0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SNX18Q96RF0 AC009951.1-201ENST00000623674 2614 ntBASIC3.93□□□□□ -1.78
SNX18Q96RF0 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.93□□□□□ -1.78
SNX18Q96RF0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX18Q96RF0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX18Q96RF0 ZNF680P1-201ENST00000436625 1469 ntBASIC3.93□□□□□ -1.78
SNX18Q96RF0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX18Q96RF0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SNX18Q96RF0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX18Q96RF0 OR1S2-201ENST00000302592 978 ntBASIC3.93□□□□□ -1.78
SNX18Q96RF0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNX18Q96RF0 RNA5SP447-201ENST00000363749 119 ntBASIC3.93□□□□□ -1.78
SNX18Q96RF0 RNY3P3-201ENST00000363816 102 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms