Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 AC104237.2-201ENST00000612456 443 ntBASIC4.44□□□□□ -1.7
CHFRQ96EP1 AC112484.5-201ENST00000624189 228 ntBASIC4.44□□□□□ -1.7
CHFRQ96EP1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHFRQ96EP1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
CHFRQ96EP1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 MTND4P35-201ENST00000604257 1375 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 GNG5P1-201ENST00000255500 204 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 XIAPP3-201ENST00000312918 795 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU1-14P-201ENST00000362759 152 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU6-216P-201ENST00000363282 104 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNA5SP130-201ENST00000364431 114 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 SUGT1P1-201ENST00000379514 476 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 SNORA69-201ENST00000383895 132 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU1-63P-201ENST00000383902 164 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 Y_RNA.445-201ENST00000384168 102 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RPS4XP8-201ENST00000402039 771 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL121834.1-202ENST00000404494 277 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 VN1R8P-201ENST00000407739 893 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL450338.1-201ENST00000407987 512 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU4-61P-201ENST00000411243 107 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 OR51A3P-201ENST00000413596 924 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC114482.1-201ENST00000418010 247 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC083875.1-201ENST00000419509 405 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC008065.1-201ENST00000428525 348 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 MTCYBP9-201ENST00000431021 303 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL606489.2-201ENST00000433886 234 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC023347.2-201ENST00000433994 462 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 IFNA20P-201ENST00000436840 528 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RPL23AP16-201ENST00000441715 421 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 BTF3P5-201ENST00000457252 467 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 SNORD108-201ENST00000459332 71 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 MTND4P17-201ENST00000470444 350 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC006390.1-201ENST00000508068 283 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC021146.3-201ENST00000511911 260 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNA5SP401-201ENST00000515920 127 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 BTF3P12-201ENST00000519620 469 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC135001.1-201ENST00000544546 283 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL117187.1-201ENST00000555482 181 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 SUB1P2-201ENST00000556401 297 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 RN7SL703P-201ENST00000578485 302 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 MIR544B-201ENST00000582372 78 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 CKS1BP3-201ENST00000600888 237 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC245389.1-201ENST00000605141 529 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 MIR92B-201ENST00000607575 96 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 DISC2.1-201ENST00000612827 205 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC233309.1-201ENST00000619522 751 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC091925.1-201ENST00000623204 462 ntBASIC4.43□□□□□ -1.7
CHFRQ96EP1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.43□□□□□ -1.7
CHFRQ96EP1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHFRQ96EP1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 MAPK10-303ENST00000641324 3959 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 Y_RNA.395-201ENST00000383945 109 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 SNORA32.2-201ENST00000384049 122 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 SNORD116-29-201ENST00000384516 83 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 SNORD115.1-201ENST00000391109 76 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 ELOCP4-201ENST00000420090 333 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms