Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM41Q8WV44 AC083837.1-201ENST00000565297 2994 ntBASIC8.52□□□□□ -1.04
TRIM41Q8WV44 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 TPTE2P4-201ENST00000258589 1605 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 SMG1P7-201ENST00000565246 2704 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 Y_RNA.60-201ENST00000362831 98 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 Y_RNA.477-201ENST00000384352 108 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 RNU2-23P-201ENST00000410545 195 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AL590632.1-201ENST00000424289 371 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 GZMAP1-201ENST00000503054 631 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AC097486.1-201ENST00000515331 210 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 RNU6-798P-201ENST00000516912 103 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 MIR3138-201ENST00000585238 82 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AC010615.1-201ENST00000594254 1764 ntBASIC8.52□□□□□ -1.05
TRIM41Q8WV44 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM41Q8WV44 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 Y_RNA.39-201ENST00000362620 98 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 Y_RNA.380-201ENST00000365663 111 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 PGBD4P6-201ENST00000421501 610 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 RPS15AP10-201ENST00000432472 382 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AC116533.1-201ENST00000459748 321 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 RN7SL809P-201ENST00000482040 297 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 MIR4504-201ENST00000577413 92 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AC023813.4-201ENST00000607580 580 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AC098479.1-201ENST00000609225 154 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AL596245.1-201ENST00000618994 362 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 SOCS5P3-201ENST00000425115 1576 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 AP000756.2-201ENST00000624168 2567 ntBASIC8.51□□□□□ -1.05
TRIM41Q8WV44 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
TRIM41Q8WV44 MTND5P7-201ENST00000413558 1798 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 Y_RNA.2-201ENST00000362330 96 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 SNORA20.1-201ENST00000364790 130 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 RNU6-61P-201ENST00000365528 109 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 MIR1302-6-201ENST00000408466 90 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 RPL30P2-201ENST00000414021 291 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 RPL7AP25-201ENST00000423357 805 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC092162.1-201ENST00000432828 434 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 RPS29P9-201ENST00000440360 171 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC073073.1-201ENST00000493920 463 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 RPL23AP94-201ENST00000512518 302 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC098976.1-201ENST00000513014 541 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 SNORA31.9-201ENST00000516429 84 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 MRPL49P2-201ENST00000521066 465 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AC012339.2-201ENST00000523996 453 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 ARF4P1-201ENST00000605447 541 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 AP001486.3-201ENST00000615334 372 ntBASIC8.5□□□□□ -1.05
TRIM41Q8WV44 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM41Q8WV44 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 AC093671.1-201ENST00000624981 2929 ntBASIC8.49□□□□□ -1.05
TRIM41Q8WV44 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
TRIM41Q8WV44 RNU6-472P-201ENST00000384299 107 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms