Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC002487.1-201ENST00000604565 994 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC005000.2-201ENST00000605468 310 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLHC1Q8NHS4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLHC1Q8NHS4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLHC1Q8NHS4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 RNU4-27P-201ENST00000410889 139 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 MTCO3P43-201ENST00000440974 771 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AL121871.1-201ENST00000443413 436 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 RPS15AP27-201ENST00000449183 343 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 OR51B8P-201ENST00000449892 769 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 RNU6-420P-201ENST00000458780 107 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC080014.1-201ENST00000496877 1201 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 VN1R104P-201ENST00000505115 1009 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC087808.1-201ENST00000520501 361 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 GLYCAM1-201ENST00000546596 285 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.53□□□□□ -2
CLHC1Q8NHS4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 AC079395.3-201ENST00000615161 484 ntBASIC2.53□□□□□ -2
CLHC1Q8NHS4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2.01
CLHC1Q8NHS4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2.01
CLHC1Q8NHS4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2.01
CLHC1Q8NHS4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-251P-201ENST00000363235 104 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-115P-201ENST00000364310 107 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL445183.3-201ENST00000414168 502 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 ST13P20-201ENST00000447996 1065 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC011352.3-201ENST00000505162 593 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 SETP12-201ENST00000514068 805 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-1102P-201ENST00000516149 96 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 RNU6-798P-201ENST00000516912 103 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 SNORA31.18-201ENST00000517043 134 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 CKS1BP7-201ENST00000522230 235 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 TRAV28-201ENST00000557548 323 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AMZ2P1-203ENST00000565833 850 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC005498.1-201ENST00000592125 465 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 DUXAP3-201ENST00000603616 594 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AP005137.2-201ENST00000609238 400 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 BX664608.1-201ENST00000610519 487 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AL356585.4-201ENST00000623078 1229 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 AC073308.1-201ENST00000623696 305 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
CLHC1Q8NHS4 Z82209.1-201ENST00000422141 2135 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 GDI2P1-201ENST00000429312 1336 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 RNU6-650P-201ENST00000365658 111 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 MIR128-1-201ENST00000384921 82 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 MIR634-201ENST00000385208 97 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 WASF1P1-201ENST00000447560 1131 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms