Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 RNA5SP138-201ENST00000365098 114 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 RNU2-68P-201ENST00000410878 191 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 XKRY2-201ENST00000442362 1093 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AL109741.2-201ENST00000455561 343 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AC104629.2-201ENST00000468627 598 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AC090071.1-201ENST00000507713 644 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 snoZ278.1-201ENST00000517059 112 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 MIR6504-201ENST00000613520 61 ntBASIC2.54□□□□□ -2
ARHGEF28Q8N1W1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 RPL23AP20-201ENST00000447965 421 ntBASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 RPL30P11-201ENST00000495304 339 ntBASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 HMGB1P1-201ENST00000522557 636 ntBASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 CENPUP2-201ENST00000555897 1186 ntBASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.53□□□□□ -2
ARHGEF28Q8N1W1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 RNA5SP37-201ENST00000365420 130 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 SNORA51.11-201ENST00000384442 131 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 AC092798.1-201ENST00000458542 409 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 SNRPGP3-201ENST00000469405 227 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 MIR4303-201ENST00000581299 66 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 MIR548Y-201ENST00000582739 110 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 FAM60CP-201ENST00000591086 664 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 AC022079.2-201ENST00000619739 566 ntBASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
ARHGEF28Q8N1W1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 Y_RNA.191-201ENST00000363972 113 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 MIR1323-201ENST00000408090 73 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 PTGES3P5-201ENST00000455109 434 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AP000790.1-201ENST00000528891 737 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 CBX3P4-201ENST00000538909 354 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 ZNF192P1-203ENST00000565888 810 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC090751.1-201ENST00000566966 267 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 MTND4LP24-201ENST00000572277 291 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 PCNAP1-202ENST00000595299 752 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AP003117.1-201ENST00000602771 554 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 SNORA67.5-201ENST00000391036 107 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AL021407.1-201ENST00000404531 386 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 HMGB1P13-201ENST00000406019 642 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 HMGB1P12-201ENST00000438594 598 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 HSPE1P28-201ENST00000443139 211 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 ARL5AP2-201ENST00000444698 533 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC005021.1-201ENST00000608730 355 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 MIR7973-1-201ENST00000614683 76 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 AC009950.2-201ENST00000636548 183 ntBASIC2.51□□□□□ -2.01
ARHGEF28Q8N1W1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 RNA5SP325-201ENST00000363756 130 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 RPL23AP33-201ENST00000442301 452 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 HMGN2P21-201ENST00000447764 270 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AC107393.1-201ENST00000512403 346 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AC117532.1-201ENST00000514638 323 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 MIR449C-201ENST00000516047 92 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 RPS3AP4-201ENST00000555161 764 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 AC010615.3-201ENST00000597319 394 ntBASIC2.5□□□□□ -2.01
ARHGEF28Q8N1W1 KATNBL1P1-201ENST00000605192 748 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms