Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU1-140P-201ENST00000365040 165 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC119751.3-201ENST00000399720 670 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 HMGB1P17-201ENST00000403495 628 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 RPS7P13-201ENST00000413955 498 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 MTATP6P27-201ENST00000416987 621 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AL022400.1-201ENST00000423946 935 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 RPL35AP12-201ENST00000425362 338 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC006548.1-201ENST00000427470 102 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AL590233.1-201ENST00000430017 456 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 ZYG11AP1-201ENST00000430329 837 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 EEF1E1P1-201ENST00000446998 430 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 MTCO3P11-201ENST00000455103 774 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC004263.1-201ENST00000479327 332 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC023424.2-201ENST00000493479 777 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 HSPA8P13-201ENST00000523715 472 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC022080.3-201ENST00000544433 482 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 EEF1B2P4-201ENST00000551398 348 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 NIFKP6-201ENST00000598115 845 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC131159.1-201ENST00000621854 213 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 CR381572.1-201ENST00000625098 102 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 OR4G11P-202ENST00000642116 1414 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC138915.3-201ENST00000562908 1389 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 MIR22-201ENST00000362190 85 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 SNORA71.1-201ENST00000364523 117 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RNU6-1200P-201ENST00000384162 107 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RNU6-253P-201ENST00000384730 105 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AF228730.1-201ENST00000397972 663 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC110754.1-201ENST00000399740 601 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 PIGPP2-201ENST00000411569 458 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RAP1BP1-201ENST00000412709 553 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC092447.6-201ENST00000414578 210 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AIMP1P1-201ENST00000418670 937 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC011233.1-201ENST00000422812 283 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RPS12P18-201ENST00000442381 270 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RPL7P52-201ENST00000449200 742 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 MTND1P31-201ENST00000449206 961 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RN7SL330P-201ENST00000469709 307 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC068587.2-201ENST00000478386 781 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL049830.2-201ENST00000480072 201 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 HSPE1P23-201ENST00000509838 286 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 TXNP6-201ENST00000510190 310 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 MTCO2P32-201ENST00000514865 403 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 DUXAP5-201ENST00000529668 529 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 BBIP1P1-201ENST00000602999 279 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL137843.1-201ENST00000605078 385 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL590282.1-201ENST00000610379 1136 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AC120349.3-201ENST00000624377 529 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 AL356473.1-201ENST00000406203 1408 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 ZNF826P-207ENST00000622273 1910 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.42□□□□□ -1.86
CCDC60Q8IWA6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 RNU6-952P-201ENST00000391164 108 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 EI24P2-201ENST00000397776 1076 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AL122016.1-201ENST00000403365 367 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 RPL7P25-201ENST00000404151 721 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 TPMTP2-201ENST00000414372 726 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 ARF4P2-201ENST00000430209 526 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 MTND5P25-201ENST00000430499 799 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms