Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 DUXAP3-201ENST00000603616 594 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 YPEL5P2-201ENST00000605553 359 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC106028.5-201ENST00000610332 395 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC004009.2-201ENST00000623016 728 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 MIR1322-201ENST00000638013 71 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 AC092593.1-201ENST00000515413 1815 ntBASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC50Q8IVM0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC233263.6-201ENST00000631132 1963 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 GABRG2-229ENST00000641017 3628 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 DEFA7P-201ENST00000382676 285 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 RNU1-109P-201ENST00000383960 147 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 MIR493-201ENST00000385254 89 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 SNORA40.2-201ENST00000390847 128 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AL512633.1-201ENST00000399931 655 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AL138885.1-201ENST00000405921 675 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 USP9YP36-201ENST00000424581 829 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 MTATP6P4-201ENST00000427725 675 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 MTND2P5-201ENST00000432656 1006 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 MTCYBP45-201ENST00000435243 565 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 TRGVB-201ENST00000453257 471 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 PNPLA4P1-201ENST00000458328 305 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 RNA5SP310-201ENST00000459084 116 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AP001992.1-205ENST00000462248 379 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AIG1P1-201ENST00000503376 148 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 MTCYBP16-201ENST00000509187 1129 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 RNU6-1225P-201ENST00000516336 65 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 ZNF861P-201ENST00000588126 639 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC060766.3-201ENST00000591442 263 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AL392048.1-201ENST00000613946 534 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AC123767.1-202ENST00000620407 817 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 AP000676.4-201ENST00000624659 623 ntBASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC50Q8IVM0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 RNU6-851P-201ENST00000384565 107 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL136372.1-201ENST00000403060 228 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC068533.2-201ENST00000411872 306 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC019178.2-201ENST00000423595 505 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 USP9YP22-201ENST00000438971 294 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 RPL23AP58-201ENST00000440453 469 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 MTCYBP11-201ENST00000447254 1109 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 ST13P20-201ENST00000447996 1065 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL353691.1-201ENST00000451332 387 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 OFD1P3Y-201ENST00000453312 783 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC083906.5-201ENST00000503722 328 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC025881.1-201ENST00000518851 512 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL133271.1-201ENST00000538229 291 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 CR383656.7-201ENST00000548164 174 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AL391156.1-201ENST00000554965 554 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC138761.3-201ENST00000579993 334 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 DNAJC19P3-201ENST00000594491 331 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 VN1R83P-201ENST00000595685 445 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC007179.3-201ENST00000604976 235 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC069545.1-201ENST00000605671 358 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC005046.1-201ENST00000608515 625 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC023158.2-201ENST00000614876 543 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 MIR3651-201ENST00000630427 90 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 AC099654.8-201ENST00000637757 681 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 OR4G11P-202ENST00000642116 1414 ntBASIC2.93□□□□□ -1.94
CCDC50Q8IVM0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 SNORD21-201ENST00000383953 95 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 Y_RNA.472-201ENST00000384322 102 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms