Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 HMGB1P28-201ENST00000507778 552 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC008885.1-201ENST00000514930 301 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AP001804.3-201ENST00000525146 880 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 SLC2A13P1-201ENST00000531560 322 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 HIGD1AP17-201ENST00000554576 276 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC090695.1-201ENST00000561269 1222 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 MTND3P13-201ENST00000574391 343 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 OR4K8P-201ENST00000578842 1048 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 VN1R83P-201ENST00000595685 445 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC025588.4-201ENST00000615802 908 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC244100.1-202ENST00000621554 382 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC026422.1-201ENST00000623961 452 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 FAT1P1-201ENST00000406588 507 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AL355143.1-201ENST00000407101 841 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC068533.2-201ENST00000411872 306 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AL645937.1-202ENST00000421799 937 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC005326.1-201ENST00000429197 123 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AL513043.1-201ENST00000439124 535 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MRPL50P4-201ENST00000446432 475 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MTCYBP17-201ENST00000503579 789 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC074250.1-201ENST00000511117 192 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 SNORA70.16-201ENST00000516390 95 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC091163.3-201ENST00000518269 1144 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC010376.1-201ENST00000522101 334 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AL355836.1-201ENST00000555951 870 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AP005205.1-201ENST00000563503 508 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MIR4444-1-201ENST00000581696 74 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MIR4444-2-201ENST00000584390 74 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 GLUD1P4-201ENST00000590914 418 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC069304.2-201ENST00000605154 435 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC018645.2-201ENST00000609151 472 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC243773.3-201ENST00000613270 256 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 MIR7112-201ENST00000616126 65 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 OR1S1-201ENST00000624470 978 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC004808.1-201ENST00000627671 721 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 AC013437.2-201ENST00000639587 677 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 TAB3P1-202ENST00000452645 1634 ntBASIC2.78□□□□□ -1.96
NUDCD3Q8IVD9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AP003122.5-201ENST00000527668 3766 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AL356131.1-201ENST00000405826 414 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 MTND2P20-201ENST00000440805 661 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AL358232.1-201ENST00000448030 501 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AL359385.1-201ENST00000456509 365 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 RPL21P131-201ENST00000497298 483 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC114322.1-201ENST00000506771 926 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC009812.2-201ENST00000517657 457 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 HSPA8P13-201ENST00000523715 472 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 CCNG2P1-201ENST00000549521 1000 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AL138880.2-201ENST00000616214 239 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 CR381653.2-201ENST00000624041 768 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AC097714.1-201ENST00000511272 1647 ntBASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NUDCD3Q8IVD9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUDCD3Q8IVD9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.76□□□□□ -1.97
NUDCD3Q8IVD9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms