Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 TPMTP3-201ENST00000411928 735 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC098592.1-201ENST00000419352 333 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 RPL31P12-201ENST00000422587 358 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 UBE2FP3-201ENST00000436366 524 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC091862.1-201ENST00000438016 1100 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL831737.1-201ENST00000441288 271 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 HSPE1P6-201ENST00000479457 291 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL049830.2-201ENST00000480072 201 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC022447.3-201ENST00000506865 495 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 SNORA70.24-201ENST00000517233 118 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 RNU6-711P-201ENST00000517255 106 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC013828.2-201ENST00000532487 235 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC136618.2-201ENST00000575091 400 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC060771.1-201ENST00000582031 164 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AC087683.2-201ENST00000611384 326 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 AL355365.1-201ENST00000616480 294 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 MIR6076-201ENST00000617521 113 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PRPF39Q86UA1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.84
PRPF39Q86UA1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.84
PRPF39Q86UA1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
PRPF39Q86UA1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 DDX10P1-201ENST00000448545 1933 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 RNU6-432P-201ENST00000384196 109 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 RNVU1-14-201ENST00000384770 164 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 MIR1305-201ENST00000408300 86 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC233728.2-201ENST00000425348 757 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC008850.1-201ENST00000427546 362 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL590383.1-201ENST00000428602 75 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC097713.2-201ENST00000430199 356 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL008629.1-201ENST00000438615 184 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC010468.1-201ENST00000461022 817 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 RPL21P10-201ENST00000463521 490 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC072039.1-201ENST00000477611 581 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC118282.1-201ENST00000506408 765 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 MIR2276-201ENST00000516886 89 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AP000926.4-201ENST00000527351 454 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC011611.1-201ENST00000552179 197 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 NCAPGP2-201ENST00000557911 754 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC022146.1-201ENST00000595307 847 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC106791.2-201ENST00000604680 391 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AP003355.3-201ENST00000623465 114 ntBASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRPF39Q86UA1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms