Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPL23AP55-201ENST00000498163 452 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC091912.1-201ENST00000511351 248 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 RNU6-615P-201ENST00000516065 106 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC007991.1-201ENST00000522680 631 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC093227.2-201ENST00000589357 285 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AL161616.1-201ENST00000611867 286 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AL139099.4-201ENST00000614802 114 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC134882.1-201ENST00000603738 1676 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
FOXR1Q6PIV2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 snoU2_19.2-201ENST00000363024 80 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 SNORA58B-201ENST00000364259 136 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 Y_RNA.352-201ENST00000365439 102 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU6-214P-201ENST00000384130 107 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU6-611P-201ENST00000384276 104 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU6-171P-201ENST00000384354 107 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 MIR613-201ENST00000385248 95 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU2-20P-201ENST00000410425 191 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU6-387P-201ENST00000411331 105 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 DPPA2P3-201ENST00000411853 655 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC005726.1-201ENST00000494679 427 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 RNU6-1278P-201ENST00000516130 107 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC009643.1-201ENST00000532030 391 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 OR10G5P-201ENST00000532733 358 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AL390123.1-201ENST00000603216 237 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AL355877.2-201ENST00000603670 358 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AL138889.2-201ENST00000603883 242 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 MZT1P2-201ENST00000604387 248 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ELOCP5-201ENST00000604924 333 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC073657.2-201ENST00000605661 303 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 NANOGP3-201ENST00000605855 286 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AC093799.2-201ENST00000610062 578 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AL359547.2-201ENST00000615810 418 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 AL391684.1-202ENST00000641293 1636 ntBASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXR1Q6PIV2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 Y_RNA.122-201ENST00000363331 96 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 Y_RNA.183-201ENST00000363882 113 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 RNU6-434P-201ENST00000384376 107 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 MIR1271-201ENST00000408537 86 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC017078.1-201ENST00000416146 368 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AL645568.3-201ENST00000433683 316 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 PTMAP6-201ENST00000439110 327 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 RPEP5-201ENST00000441137 268 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms