Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LSM1P1-201ENST00000438629 273 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC104685.1-201ENST00000502445 371 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC021146.5-201ENST00000503544 545 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC034159.1-201ENST00000513885 583 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 SNORA31.22-201ENST00000517204 135 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC022690.1-201ENST00000526681 550 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC023538.1-201ENST00000534576 736 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MIR3922-201ENST00000585192 84 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC022022.2-201ENST00000602989 360 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 RNU6-88P-201ENST00000606801 100 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC024560.3-201ENST00000608482 349 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL591516.1-201ENST00000611326 274 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MIR6130-201ENST00000619419 109 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC008443.7-201ENST00000622195 246 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 RNU6-723P-201ENST00000383973 107 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 GOT2P5-201ENST00000433995 546 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 RSU1P2-202ENST00000437884 485 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 RPL17P49-201ENST00000443728 411 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP000542.1-201ENST00000448473 371 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AL359385.1-201ENST00000456509 365 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 SNORA84-201ENST00000459229 133 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 RPL21P8-201ENST00000465083 535 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 HMGN2P13-201ENST00000476476 274 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP001025.2-201ENST00000490908 477 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC093809.1-201ENST00000509155 340 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC026801.2-201ENST00000515352 425 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 SNORA67.7-201ENST00000516664 135 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP001804.3-201ENST00000525146 880 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC055876.1-202ENST00000567053 138 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC008739.3-201ENST00000603262 127 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC008962.1-201ENST00000605729 304 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC034229.4-201ENST00000607861 441 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC079395.3-201ENST00000615161 484 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC068831.7-201ENST00000616954 363 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC006133.1-201ENST00000617106 264 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AL356596.1-201ENST00000624230 379 ntBASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
CASC4Q6P4E1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASC4Q6P4E1 AL049781.1-201ENST00000623195 3585 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 RPL21P132-201ENST00000331267 462 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 DEFB108F-201ENST00000344638 222 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 U3.11-201ENST00000364476 212 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASC4Q6P4E1 RNU6-76P-201ENST00000384060 104 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 RNU6-114P-201ENST00000384704 105 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 SAR1AP2-201ENST00000392696 594 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.28□□□□□ -1.88
CASC4Q6P4E1 RPS3AP25-201ENST00000411660 793 ntBASIC3.28□□□□□ -1.88
CASC4Q6P4E1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms