Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 RNA5SP335-201ENST00000363817 110 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.272-201ENST00000364696 102 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 RNU6-923P-201ENST00000364753 107 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 RNU6-790P-201ENST00000384479 105 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 Y_RNA.592-201ENST00000410274 109 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 HMGN1P24-201ENST00000412282 298 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 RPS12P5-201ENST00000423449 371 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AC092162.1-201ENST00000432828 434 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AC016696.1-201ENST00000446949 318 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AL389915.2-201ENST00000454576 441 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AC010469.2-201ENST00000496412 480 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AC006116.3-201ENST00000592968 361 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 AC000123.2-201ENST00000623124 461 ntBASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CTC1Q2NKJ3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CTC1Q2NKJ3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CTC1Q2NKJ3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CTC1Q2NKJ3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.44-201ENST00000362676 108 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 RNU6-596P-201ENST00000365395 98 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC108075.1-201ENST00000424692 529 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 OR6D1P-201ENST00000436165 939 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 FHP1-201ENST00000442741 703 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AP000926.1-201ENST00000479573 241 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC007686.1-201ENST00000488511 463 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 NDUFB4P9-201ENST00000511646 388 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 RNA5SP272-201ENST00000516095 111 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 GSTP1P1-201ENST00000548078 319 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC090615.1-201ENST00000577519 154 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AC074140.1-201ENST00000621617 208 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 IGHVIII-44-202ENST00000636235 289 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTC1Q2NKJ3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RNA5SP339-201ENST00000390987 122 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 U3.42-201ENST00000408746 214 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RPL35AP22-201ENST00000436855 335 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 NUTF2P7-201ENST00000453086 375 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RNU7-59P-201ENST00000459101 61 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RPS18P6-201ENST00000476880 458 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 RNU6-1092P-201ENST00000516955 87 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 AC100784.1-201ENST00000522790 310 ntBASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTC1Q2NKJ3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms