Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 Y_RNA.224-201ENST00000364308 111 ntBASIC2.09□□□□□ -2.07
SCN7AQ01118 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN7AQ01118 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
SCN7AQ01118 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN7AQ01118 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN7AQ01118 AC012181.1-201ENST00000479895 423 ntBASIC2.09□□□□□ -2.07
SCN7AQ01118 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN7AQ01118 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.09□□□□□ -2.07
SCN7AQ01118 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.09□□□□□ -2.07
SCN7AQ01118 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN7AQ01118 RNA5SP108-201ENST00000605921 117 ntBASIC2.09□□□□□ -2.07
SCN7AQ01118 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN7AQ01118 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.09□□□□□ -2.07
SCN7AQ01118 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SCN7AQ01118 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SCN7AQ01118 ZNF876P-202ENST00000398732 1485 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN7AQ01118 MTCO1P43-201ENST00000431831 488 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN7AQ01118 ARPC3P2-201ENST00000457786 533 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 AC092798.1-201ENST00000458542 409 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 AC079203.1-201ENST00000487972 404 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 RNU6-56P-201ENST00000516986 93 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN7AQ01118 uc_338.5-201ENST00000611839 155 ntBASIC2.09□□□□□ -2.08
SCN7AQ01118 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN7AQ01118 AC027514.1-201ENST00000588561 1603 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 Z98749.2-208ENST00000381646 500 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 RNU2-68P-201ENST00000410878 191 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN7AQ01118 SSXP9-201ENST00000417503 292 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AC234782.4-201ENST00000417646 1048 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN7AQ01118 RPL30P3-201ENST00000424262 333 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AC009965.2-201ENST00000425328 970 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN7AQ01118 RPL21P103-201ENST00000479921 488 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AC069528.1-202ENST00000482888 637 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 Y_RNA.670-201ENST00000516255 105 ntBASIC2.08□□□□□ -2.08
SCN7AQ01118 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN7AQ01118 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN7AQ01118 RNU1-57P-201ENST00000384491 166 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 MIR92A2-201ENST00000385299 75 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 MIR1276-201ENST00000408707 83 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 VN1R31P-201ENST00000417498 730 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN7AQ01118 DNAJC19P4-201ENST00000440115 345 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 OR7L1P-201ENST00000456181 380 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN7AQ01118 AIG1P1-201ENST00000503376 148 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN7AQ01118 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN7AQ01118 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN7AQ01118 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN7AQ01118 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
SCN7AQ01118 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN7AQ01118 MTND4LP21-201ENST00000415303 295 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 BX510359.4-201ENST00000423750 193 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AC239860.2-201ENST00000525886 270 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN7AQ01118 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SCN7AQ01118 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN7AQ01118 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN7AQ01118 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN7AQ01118 AC114973.1-201ENST00000429057 632 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 HMGB1P27-201ENST00000431429 603 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 Z73417.1-201ENST00000447373 778 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN7AQ01118 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.06□□□□□ -2.08
SCN7AQ01118 RNA5SP82-201ENST00000516707 92 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN7AQ01118 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN7AQ01118 AL110115.1-201ENST00000614396 364 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 AL589935.2-201ENST00000616471 1231 ntBASIC2.06□□□□□ -2.08
SCN7AQ01118 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN7AQ01118 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN7AQ01118 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SCN7AQ01118 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SCN7AQ01118 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SCN7AQ01118 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN7AQ01118 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN7AQ01118 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SCN7AQ01118 AL589994.1-201ENST00000404962 340 ntBASIC2.05□□□□□ -2.08
SCN7AQ01118 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN7AQ01118 RPL23AP16-201ENST00000441715 421 ntBASIC2.05□□□□□ -2.08
SCN7AQ01118 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.05□□□□□ -2.08
SCN7AQ01118 AC109464.2-201ENST00000510242 943 ntBASIC2.05□□□□□ -2.08
SCN7AQ01118 RNU4-60P-201ENST00000517239 135 ntBASIC2.05□□□□□ -2.08
SCN7AQ01118 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.05□□□□□ -2.08
SCN7AQ01118 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN7AQ01118 HSPE1P20-201ENST00000538133 289 ntBASIC2.05□□□□□ -2.08
SCN7AQ01118 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN7AQ01118 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms