Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 TMEM167AP1-201ENST00000423409 219 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 MTND4LP10-201ENST00000435146 291 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC5Q00444 AL691517.1-201ENST00000440833 1235 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC5Q00444 MTND5P8-201ENST00000449817 1083 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 TRBV26-201ENST00000456572 344 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 XKRY-201ENST00000510392 1100 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC5Q00444 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC5Q00444 AC011471.1-201ENST00000585766 187 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC5Q00444 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC5Q00444 AC034102.8-201ENST00000615146 484 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 MFSD8-245ENST00000641743 948 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC5Q00444 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC5Q00444 PABPC1P9-201ENST00000426076 1612 ntBASIC2.13□□□□□ -2.07
HOXC5Q00444 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.13□□□□□ -2.07
HOXC5Q00444 CKAP2P1-201ENST00000555477 2049 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXC5Q00444 U3.12-201ENST00000364498 214 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 RPS4XP8-201ENST00000402039 771 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC5Q00444 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC5Q00444 TRIM60P13-201ENST00000432350 1283 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC010099.1-201ENST00000455434 375 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC093767.1-201ENST00000504523 156 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AC109471.1-201ENST00000511631 612 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 SNORA70.16-201ENST00000516390 95 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AC087272.1-201ENST00000523624 533 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 OR4R1P-201ENST00000529879 463 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 EEF1B2P4-201ENST00000551398 348 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC008739.2-201ENST00000597006 317 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 NRBF2P5-201ENST00000603087 788 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC5Q00444 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AP006248.3-201ENST00000623580 594 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AC110079.1-202ENST00000635213 138 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
HOXC5Q00444 AC090740.1-201ENST00000623193 2262 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 AL513185.3-201ENST00000433335 1300 ntBASIC2.12□□□□□ -2.07
HOXC5Q00444 NUP58P1-201ENST00000502546 1738 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HOXC5Q00444 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HOXC5Q00444 RNU6-173P-201ENST00000364215 104 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 RN7SKP140-201ENST00000411196 284 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.11□□□□□ -2.07
HOXC5Q00444 OR51A3P-201ENST00000413596 924 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AL513477.1-202ENST00000417061 214 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AL356320.2-201ENST00000417263 507 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AL137014.1-201ENST00000420490 1226 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 MTATP6P11-201ENST00000428071 670 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 EZH2P1-201ENST00000431167 291 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AL049873.1-201ENST00000480540 376 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 RN7SL636P-201ENST00000497504 294 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC135721.1-201ENST00000497954 479 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 NIFKP8-201ENST00000560500 874 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 GAS5-AS1-201ENST00000602767 694 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC5Q00444 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HOXC5Q00444 AC103798.2-201ENST00000624292 632 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 AC091925.2-201ENST00000625059 256 ntBASIC2.11□□□□□ -2.07
HOXC5Q00444 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms