Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL139276.1-201ENST00000311910 1001 ntBASIC2.26□□□□□ -2.05
ACTBP60709 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
ACTBP60709 SNORA68.1-201ENST00000364537 132 ntBASIC2.26□□□□□ -2.05
ACTBP60709 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
ACTBP60709 MIR525-201ENST00000384978 85 ntBASIC2.26□□□□□ -2.05
ACTBP60709 MIR634-201ENST00000385208 97 ntBASIC2.26□□□□□ -2.05
ACTBP60709 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ACTBP60709 AL121978.1-201ENST00000402778 359 ntBASIC2.26□□□□□ -2.05
ACTBP60709 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 AC098614.2-201ENST00000426040 255 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC009414.1-201ENST00000427200 443 ntBASIC2.26□□□□□ -2.05
ACTBP60709 RPL31P54-201ENST00000429803 370 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.26□□□□□ -2.05
ACTBP60709 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 snoU13.28-201ENST00000459235 104 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC104164.3-201ENST00000467363 1258 ntBASIC2.26□□□□□ -2.05
ACTBP60709 VN1R104P-201ENST00000505115 1009 ntBASIC2.26□□□□□ -2.05
ACTBP60709 NDUFB4P2-201ENST00000509515 391 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC100870.1-201ENST00000522035 505 ntBASIC2.26□□□□□ -2.05
ACTBP60709 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.26□□□□□ -2.05
ACTBP60709 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.26□□□□□ -2.05
ACTBP60709 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.26□□□□□ -2.05
ACTBP60709 AC023824.3-201ENST00000569003 562 ntBASIC2.26□□□□□ -2.05
ACTBP60709 BPTFP1-201ENST00000579209 492 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.26□□□□□ -2.05
ACTBP60709 VN1R92P-201ENST00000598511 928 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC040174.2-201ENST00000602701 465 ntBASIC2.26□□□□□ -2.05
ACTBP60709 KATNBL1P5-201ENST00000605015 517 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AP000254.1-201ENST00000609934 520 ntBASIC2.26□□□□□ -2.05
ACTBP60709 AC135507.2-201ENST00000612443 309 ntBASIC2.26□□□□□ -2.05
ACTBP60709 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
ACTBP60709 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.26□□□□□ -2.05
ACTBP60709 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ACTBP60709 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
ACTBP60709 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ACTBP60709 SGO1P1-201ENST00000603525 1447 ntBASIC2.25□□□□□ -2.05
ACTBP60709 NUP58P1-201ENST00000502546 1738 ntBASIC2.25□□□□□ -2.05
ACTBP60709 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTBP60709 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTBP60709 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTBP60709 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTBP60709 OR5T3-201ENST00000303059 1023 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
ACTBP60709 DEFB108F-201ENST00000344638 222 ntBASIC2.25□□□□□ -2.05
ACTBP60709 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ACTBP60709 SNORA44-201ENST00000384584 132 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RNU6-1072P-201ENST00000384703 107 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RNU6-443P-201ENST00000384780 107 ntBASIC2.25□□□□□ -2.05
ACTBP60709 MIR16-1-201ENST00000385271 89 ntBASIC2.25□□□□□ -2.05
ACTBP60709 UBA52P6-201ENST00000399822 382 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AL023807.1-201ENST00000407932 359 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 AL139132.1-201ENST00000431587 344 ntBASIC2.25□□□□□ -2.05
ACTBP60709 ZFAND6P1-201ENST00000434138 605 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 AC090774.1-201ENST00000435925 246 ntBASIC2.25□□□□□ -2.05
ACTBP60709 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
ACTBP60709 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.25□□□□□ -2.05
ACTBP60709 AC005002.1-201ENST00000447458 540 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RNU6-420P-201ENST00000458780 107 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RNU7-23P-201ENST00000459465 62 ntBASIC2.25□□□□□ -2.05
ACTBP60709 KC877373.1-201ENST00000479066 408 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RPL21P47-201ENST00000483696 477 ntBASIC2.25□□□□□ -2.05
ACTBP60709 FAM172BP-201ENST00000487497 1089 ntBASIC2.25□□□□□ -2.05
ACTBP60709 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
ACTBP60709 DEFB108D-201ENST00000527787 222 ntBASIC2.25□□□□□ -2.05
ACTBP60709 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 GLYCAM1-201ENST00000546596 285 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AC007115.1-201ENST00000546853 234 ntBASIC2.25□□□□□ -2.05
ACTBP60709 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.25□□□□□ -2.05
ACTBP60709 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.25□□□□□ -2.05
ACTBP60709 AL451007.1-201ENST00000595491 289 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AC133794.1-201ENST00000602731 914 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AC112503.2-201ENST00000609005 552 ntBASIC2.25□□□□□ -2.05
ACTBP60709 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.25□□□□□ -2.05
ACTBP60709 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTBP60709 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.25□□□□□ -2.05
ACTBP60709 AC009902.3-201ENST00000606235 2172 ntBASIC2.25□□□□□ -2.05
ACTBP60709 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.24□□□□□ -2.05
ACTBP60709 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ACTBP60709 AC080100.1-201ENST00000624239 5356 ntBASIC2.24□□□□□ -2.05
ACTBP60709 SNORD82-201ENST00000365530 70 ntBASIC2.24□□□□□ -2.05
ACTBP60709 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
ACTBP60709 U3.26-201ENST00000391236 204 ntBASIC2.24□□□□□ -2.05
ACTBP60709 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
ACTBP60709 AC112220.1-201ENST00000434628 355 ntBASIC2.24□□□□□ -2.05
ACTBP60709 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
ACTBP60709 RPL23AP16-201ENST00000441715 421 ntBASIC2.24□□□□□ -2.05
ACTBP60709 COX6CP12-201ENST00000446748 202 ntBASIC2.24□□□□□ -2.05
ACTBP60709 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.24□□□□□ -2.05
ACTBP60709 CACYBPP2-201ENST00000453625 678 ntBASIC2.24□□□□□ -2.05
ACTBP60709 AC011825.1-201ENST00000484967 388 ntBASIC2.24□□□□□ -2.05
ACTBP60709 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.24□□□□□ -2.05
ACTBP60709 HMGB3P3-201ENST00000510526 400 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms