Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC087190.1-201ENST00000484462 480 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC093591.1-201ENST00000491435 481 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P129-201ENST00000491732 478 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 RPL21P16-201ENST00000495531 483 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC114981.1-201ENST00000503897 678 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.8□□□□□ -1.96
PKNOX1P55347 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AC010374.2-201ENST00000512933 535 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC093677.1-201ENST00000514414 678 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 OR4K8P-201ENST00000578842 1048 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 VN1R78P-201ENST00000597393 564 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC091057.3-201ENST00000602684 733 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 MTND3P19-201ENST00000603825 345 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC080013.4-201ENST00000607624 649 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC106028.5-201ENST00000610332 395 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 MIR6076-201ENST00000617521 113 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 AC012314.7-201ENST00000619693 93 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.8□□□□□ -1.96
PKNOX1P55347 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.8□□□□□ -1.96
PKNOX1P55347 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.8□□□□□ -1.96
PKNOX1P55347 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX1P55347 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 TAB3P1-202ENST00000452645 1634 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.79□□□□□ -1.96
PKNOX1P55347 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL513185.3-201ENST00000433335 1300 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.79□□□□□ -1.96
PKNOX1P55347 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 RNU6-1122P-201ENST00000384449 107 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL356131.1-201ENST00000405826 414 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 RNU4-22P-201ENST00000411058 166 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 MTATP6P27-201ENST00000416987 621 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL354692.1-201ENST00000423044 315 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 SAR1AP4-201ENST00000429225 591 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 RAC1P7-201ENST00000445367 377 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 OR6K5P-201ENST00000447050 945 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 snoU109.3-201ENST00000459477 145 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AC034236.1-201ENST00000469891 373 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL358832.1-201ENST00000497800 389 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PKNOX1P55347 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX1P55347 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX1P55347 AL160237.3-201ENST00000604114 1013 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL031176.1-201ENST00000604554 466 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AC004853.1-201ENST00000604902 698 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 AL355493.4-201ENST00000618530 292 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.79□□□□□ -1.96
PKNOX1P55347 AL445984.1-201ENST00000637834 659 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.79□□□□□ -1.96
PKNOX1P55347 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX1P55347 AC092447.7-201ENST00000422212 1621 ntBASIC2.79□□□□□ -1.96
PKNOX1P55347 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX1P55347 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC009812.4-201ENST00000569134 1805 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 SNORA38.1-201ENST00000364172 131 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 RNU6-343P-201ENST00000364709 104 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 Y_RNA.548-201ENST00000384656 105 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 SNORA1.3-201ENST00000384676 136 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 ERHP2-201ENST00000402323 299 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 FAT1P1-201ENST00000406588 507 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 RNA5SP38-201ENST00000410750 119 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AL356320.2-201ENST00000417263 507 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 RPS3AP37-201ENST00000419176 745 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 ATG3P1-201ENST00000419507 911 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 USP9YP11-201ENST00000427537 717 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 RPL39P40-201ENST00000445481 146 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 EXOSC3P1-201ENST00000448649 500 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 FTH1P2-201ENST00000466086 412 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC103975.1-201ENST00000482506 483 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms