Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.12□□□□□ -1.75
COPB1P53618 SDCBPP1-201ENST00000440192 890 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 NANOGP10-201ENST00000453325 895 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC027673.1-201ENST00000456245 405 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RBM43P1-201ENST00000476891 1081 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RPS3AP14-201ENST00000483907 780 ntBASIC4.12□□□□□ -1.75
COPB1P53618 FAM92A1P2-202ENST00000504766 877 ntBASIC4.12□□□□□ -1.75
COPB1P53618 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 SAP18P1-201ENST00000512058 390 ntBASIC4.12□□□□□ -1.75
COPB1P53618 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COPB1P53618 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.12□□□□□ -1.75
COPB1P53618 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
COPB1P53618 AC022616.6-201ENST00000520479 119 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 MIR4286-201ENST00000580651 93 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.12□□□□□ -1.75
COPB1P53618 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.12□□□□□ -1.75
COPB1P53618 KLKP1-201ENST00000595979 403 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC245389.1-201ENST00000605141 529 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AL365503.1-201ENST00000605247 905 ntBASIC4.12□□□□□ -1.75
COPB1P53618 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 AL596245.1-201ENST00000618994 362 ntBASIC4.12□□□□□ -1.75
COPB1P53618 MIR6500-201ENST00000622700 86 ntBASIC4.12□□□□□ -1.75
COPB1P53618 MIR3688-2-201ENST00000636963 87 ntBASIC4.12□□□□□ -1.75
COPB1P53618 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.12□□□□□ -1.75
COPB1P53618 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPB1P53618 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPB1P53618 MTND5P33-201ENST00000571250 1450 ntBASIC4.11□□□□□ -1.75
COPB1P53618 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COPB1P53618 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.11□□□□□ -1.75
COPB1P53618 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
COPB1P53618 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.11□□□□□ -1.75
COPB1P53618 FRG1BP-201ENST00000278882 761 ntBASIC4.11□□□□□ -1.75
COPB1P53618 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 SNORD82-201ENST00000365530 70 ntBASIC4.11□□□□□ -1.75
COPB1P53618 Y_RNA.372-201ENST00000365599 102 ntBASIC4.11□□□□□ -1.75
COPB1P53618 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COPB1P53618 Y_RNA.450-201ENST00000384198 113 ntBASIC4.11□□□□□ -1.75
COPB1P53618 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COPB1P53618 PPIAP31-201ENST00000405422 495 ntBASIC4.11□□□□□ -1.75
COPB1P53618 RHEBP3-201ENST00000411920 351 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AC245052.5-201ENST00000416320 649 ntBASIC4.11□□□□□ -1.75
COPB1P53618 MTND3P17-201ENST00000416968 344 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 AC069157.1-201ENST00000421749 137 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 TIMM9P3-201ENST00000428659 274 ntBASIC4.11□□□□□ -1.75
COPB1P53618 OR4C10P-201ENST00000434991 931 ntBASIC4.11□□□□□ -1.75
COPB1P53618 MTND4LP10-201ENST00000435146 291 ntBASIC4.11□□□□□ -1.75
COPB1P53618 RPL7P28-201ENST00000437739 740 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AC127537.2-201ENST00000439258 465 ntBASIC4.11□□□□□ -1.75
COPB1P53618 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 AC006480.1-201ENST00000449887 378 ntBASIC4.11□□□□□ -1.75
COPB1P53618 HMGB1P15-201ENST00000453854 435 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AL359385.1-201ENST00000456509 365 ntBASIC4.11□□□□□ -1.75
COPB1P53618 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.11□□□□□ -1.75
COPB1P53618 RN7SL132P-201ENST00000478131 296 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AP002812.1-201ENST00000495378 474 ntBASIC4.11□□□□□ -1.75
COPB1P53618 ARL4AP2-201ENST00000507378 601 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.11□□□□□ -1.75
COPB1P53618 FAM92A1P1-201ENST00000528023 890 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.11□□□□□ -1.75
COPB1P53618 AC123904.2-201ENST00000548059 300 ntBASIC4.11□□□□□ -1.75
COPB1P53618 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.11□□□□□ -1.75
COPB1P53618 CENPUP2-201ENST00000555897 1186 ntBASIC4.11□□□□□ -1.75
COPB1P53618 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.11□□□□□ -1.75
COPB1P53618 AC034105.4-201ENST00000568304 277 ntBASIC4.11□□□□□ -1.75
COPB1P53618 OR10AB1P-201ENST00000609613 938 ntBASIC4.11□□□□□ -1.75
COPB1P53618 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COPB1P53618 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.11□□□□□ -1.75
COPB1P53618 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPB1P53618 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.11□□□□□ -1.75
COPB1P53618 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPB1P53618 NUP58P1-201ENST00000502546 1738 ntBASIC4.1□□□□□ -1.75
COPB1P53618 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
COPB1P53618 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPB1P53618 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPB1P53618 Y_RNA.9-201ENST00000362354 101 ntBASIC4.1□□□□□ -1.75
COPB1P53618 Y_RNA.234-201ENST00000364409 97 ntBASIC4.1□□□□□ -1.75
COPB1P53618 RNU6-867P-201ENST00000364956 107 ntBASIC4.1□□□□□ -1.75
COPB1P53618 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AL356421.1-201ENST00000403255 413 ntBASIC4.1□□□□□ -1.75
COPB1P53618 CCNG1P1-201ENST00000406783 885 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AL359704.1-201ENST00000411586 781 ntBASIC4.1□□□□□ -1.75
COPB1P53618 USP9YP6-201ENST00000413550 854 ntBASIC4.1□□□□□ -1.75
COPB1P53618 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms