Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.58□□□□□ -2
CX3CR1P49238 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CX3CR1P49238 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.58□□□□□ -2
CX3CR1P49238 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.58□□□□□ -2
CX3CR1P49238 snoU13.28-201ENST00000459235 104 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC006445.1-201ENST00000491925 405 ntBASIC2.58□□□□□ -2
CX3CR1P49238 RPL30P5-201ENST00000494923 336 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AL358832.1-201ENST00000497800 389 ntBASIC2.58□□□□□ -2
CX3CR1P49238 CAB39P1-201ENST00000502277 460 ntBASIC2.58□□□□□ -2
CX3CR1P49238 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.58□□□□□ -2
CX3CR1P49238 AC017037.2-201ENST00000513850 890 ntBASIC2.58□□□□□ -2
CX3CR1P49238 RNA5SP76-201ENST00000516277 87 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC103783.1-201ENST00000520506 373 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC118942.1-201ENST00000529674 1035 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.58□□□□□ -2
CX3CR1P49238 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
CX3CR1P49238 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.58□□□□□ -2
CX3CR1P49238 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.58□□□□□ -2
CX3CR1P49238 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.58□□□□□ -2
CX3CR1P49238 ACTR3BP3-201ENST00000565577 979 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.58□□□□□ -2
CX3CR1P49238 MIR4444-1-201ENST00000581696 74 ntBASIC2.58□□□□□ -2
CX3CR1P49238 MIR4444-2-201ENST00000584390 74 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.58□□□□□ -2
CX3CR1P49238 AC023043.3-201ENST00000593113 385 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC020895.1-201ENST00000595362 272 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC008739.2-201ENST00000597006 317 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AL390838.2-201ENST00000602394 274 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC091057.2-201ENST00000602594 792 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.58□□□□□ -2
CX3CR1P49238 AF129408.1-201ENST00000608767 431 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC009237.15-201ENST00000610252 501 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AL450472.3-201ENST00000615578 367 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC104985.3-201ENST00000623479 597 ntBASIC2.58□□□□□ -2
CX3CR1P49238 AC110079.1-202ENST00000635213 138 ntBASIC2.58□□□□□ -2
CX3CR1P49238 OR8B1P-202ENST00000641132 1178 ntBASIC2.58□□□□□ -2
CX3CR1P49238 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CX3CR1P49238 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CX3CR1P49238 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CX3CR1P49238 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.58□□□□□ -2
CX3CR1P49238 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
CX3CR1P49238 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 MTCO1P56-201ENST00000401674 224 ntBASIC2.57□□□□□ -2
CX3CR1P49238 MIR1290-201ENST00000408735 78 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL161449.1-201ENST00000414531 1199 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
CX3CR1P49238 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CR1P49238 USP9YP22-201ENST00000438971 294 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.57□□□□□ -2
CX3CR1P49238 RPL39P40-201ENST00000445481 146 ntBASIC2.57□□□□□ -2
CX3CR1P49238 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 AL162389.1-201ENST00000449233 177 ntBASIC2.57□□□□□ -2
CX3CR1P49238 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.57□□□□□ -2
CX3CR1P49238 RPL27AP5-201ENST00000469428 449 ntBASIC2.57□□□□□ -2
CX3CR1P49238 RPS3AP43-201ENST00000479743 781 ntBASIC2.57□□□□□ -2
CX3CR1P49238 RPL21P129-201ENST00000491732 478 ntBASIC2.57□□□□□ -2
CX3CR1P49238 OR2A20P-203ENST00000498397 1268 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC008885.1-201ENST00000514930 301 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.57□□□□□ -2
CX3CR1P49238 RNU6-928P-201ENST00000516876 104 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.57□□□□□ -2
CX3CR1P49238 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.57□□□□□ -2
CX3CR1P49238 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CR1P49238 YWHAZP1-201ENST00000556286 722 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL157394.1-201ENST00000562983 1224 ntBASIC2.57□□□□□ -2
CX3CR1P49238 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.57□□□□□ -2
CX3CR1P49238 AC010653.1-201ENST00000571108 881 ntBASIC2.57□□□□□ -2
CX3CR1P49238 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 AC078899.3-201ENST00000599065 212 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC015871.2-201ENST00000603605 948 ntBASIC2.57□□□□□ -2
CX3CR1P49238 BNIP3P11-201ENST00000603878 563 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AL136370.1-201ENST00000608166 691 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC009269.6-201ENST00000621778 588 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AP003476.1-201ENST00000623984 516 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC009039.2-201ENST00000624524 529 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.57□□□□□ -2
CX3CR1P49238 MIR6733-201ENST00000635723 61 ntBASIC2.57□□□□□ -2
CX3CR1P49238 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CX3CR1P49238 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.57□□□□□ -2
CX3CR1P49238 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.57□□□□□ -2
CX3CR1P49238 AP000526.1-201ENST00000603308 1388 ntBASIC2.57□□□□□ -2
CX3CR1P49238 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.57□□□□□ -2
CX3CR1P49238 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CR1P49238 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.56□□□□□ -2
CX3CR1P49238 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.56□□□□□ -2
CX3CR1P49238 RNU5A-1-201ENST00000362698 116 ntBASIC2.56□□□□□ -2
CX3CR1P49238 SNORA9.2-201ENST00000365361 133 ntBASIC2.56□□□□□ -2
CX3CR1P49238 U8.9-201ENST00000365667 134 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RNU6-76P-201ENST00000384060 104 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RNU6-198P-201ENST00000384258 104 ntBASIC2.56□□□□□ -2
CX3CR1P49238 MIR122-201ENST00000385044 85 ntBASIC2.56□□□□□ -2
CX3CR1P49238 MIR34B-201ENST00000385076 84 ntBASIC2.56□□□□□ -2
CX3CR1P49238 MIR181B1-201ENST00000385240 110 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RN7SKP220-201ENST00000410611 288 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RPL7P8-201ENST00000411964 730 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RPL7P44-201ENST00000424827 742 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms