Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC005332.6-201ENST00000613178 446 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC023158.2-201ENST00000614876 543 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSNK1A1P48729 U6.101-201ENST00000637707 76 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 LRRC77P-213ENST00000637727 880 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 AC013437.2-201ENST00000639587 677 ntBASIC2.58□□□□□ -2
CSNK1A1P48729 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
CSNK1A1P48729 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.58□□□□□ -2
CSNK1A1P48729 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSNK1A1P48729 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 SNRPEP3-201ENST00000338402 276 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 Y_RNA.25-201ENST00000362528 102 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RNU6-216P-201ENST00000363282 104 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RNU1-140P-201ENST00000365040 165 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RNU6-878P-201ENST00000384578 110 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RNU2-15P-201ENST00000410692 191 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RPL19P1-201ENST00000411635 428 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.57□□□□□ -2
CSNK1A1P48729 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.57□□□□□ -2
CSNK1A1P48729 PSMA6P3-201ENST00000428242 164 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC006946.1-201ENST00000429106 328 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.57□□□□□ -2
CSNK1A1P48729 RPS20P5-201ENST00000434808 360 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 USP9YP22-201ENST00000438971 294 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RPS3AP12-201ENST00000443616 753 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RPL23AP20-201ENST00000447965 421 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 MTND2P39-201ENST00000457230 764 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 RPL21P131-201ENST00000497298 483 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.57□□□□□ -2
CSNK1A1P48729 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.57□□□□□ -2
CSNK1A1P48729 AC096571.1-202ENST00000506634 735 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 MTCYBP16-201ENST00000509187 1129 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.57□□□□□ -2
CSNK1A1P48729 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.57□□□□□ -2
CSNK1A1P48729 LRRC6P1-201ENST00000532188 885 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC125611.2-201ENST00000551907 647 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 HMGB1P14-201ENST00000557424 591 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.57□□□□□ -2
CSNK1A1P48729 MTND3P13-201ENST00000574391 343 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 MIR3921-201ENST00000577308 85 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.57□□□□□ -2
CSNK1A1P48729 AC069431.2-201ENST00000604149 1099 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AL022099.1-201ENST00000604551 712 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC069545.1-201ENST00000605671 358 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 RPL23AP88-201ENST00000605759 454 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 AC069234.5-201ENST00000611056 416 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 ATP5A1P2-202ENST00000616464 443 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.57□□□□□ -2
CSNK1A1P48729 Z99129.2-201ENST00000619967 314 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC009269.6-201ENST00000621778 588 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC120349.2-201ENST00000625002 298 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 AC010680.1-201ENST00000590024 3590 ntBASIC2.57□□□□□ -2
CSNK1A1P48729 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSNK1A1P48729 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
CSNK1A1P48729 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 RNU5E-10P-201ENST00000363506 118 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 MIR512-1-201ENST00000384913 84 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 RNU6-882P-201ENST00000391025 103 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 SNRPEP2-201ENST00000397592 279 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AL645937.1-202ENST00000421799 937 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 RPL35AP12-201ENST00000425362 338 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.56□□□□□ -2
CSNK1A1P48729 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.56□□□□□ -2
CSNK1A1P48729 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.56□□□□□ -2
CSNK1A1P48729 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC092798.1-201ENST00000458542 409 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC069528.1-202ENST00000482888 637 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC026427.2-201ENST00000506228 536 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC113420.1-201ENST00000507903 571 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.56□□□□□ -2
CSNK1A1P48729 RNU6-1225P-201ENST00000516336 65 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSNK1A1P48729 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC087373.1-201ENST00000524920 491 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC022080.3-201ENST00000544433 482 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 SETP7-201ENST00000552169 453 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.56□□□□□ -2
CSNK1A1P48729 MIR3908-201ENST00000579798 126 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC083760.1-201ENST00000589621 670 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC020895.1-201ENST00000595362 272 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms