Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.17□□□□□ -1.9
FEN1P39748 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.17□□□□□ -1.9
FEN1P39748 CLIC4P2-201ENST00000601934 717 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC008739.3-201ENST00000603262 127 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC068313.1-201ENST00000604028 1008 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC025811.1-201ENST00000604312 472 ntBASIC3.17□□□□□ -1.9
FEN1P39748 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC097468.3-201ENST00000607956 456 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC004223.4-201ENST00000612426 332 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AL392048.1-201ENST00000613946 534 ntBASIC3.17□□□□□ -1.9
FEN1P39748 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
FEN1P39748 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.17□□□□□ -1.9
FEN1P39748 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.17□□□□□ -1.9
FEN1P39748 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FEN1P39748 PCMTD1P7-201ENST00000634506 357 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC099063.3-201ENST00000642066 185 ntBASIC3.17□□□□□ -1.9
FEN1P39748 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
FEN1P39748 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FEN1P39748 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FEN1P39748 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
FEN1P39748 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.16□□□□□ -1.9
FEN1P39748 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FEN1P39748 AC058791.1-201ENST00000608412 3198 ntBASIC3.16□□□□□ -1.9
FEN1P39748 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
FEN1P39748 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.16□□□□□ -1.9
FEN1P39748 RNU6-660P-201ENST00000364566 109 ntBASIC3.16□□□□□ -1.9
FEN1P39748 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
FEN1P39748 MIR449B-201ENST00000384995 97 ntBASIC3.16□□□□□ -1.9
FEN1P39748 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
FEN1P39748 RN7SKP266-201ENST00000410232 287 ntBASIC3.16□□□□□ -1.9
FEN1P39748 HSFY4P-201ENST00000415994 1181 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FEN1P39748 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.16□□□□□ -1.9
FEN1P39748 AL389915.1-201ENST00000422463 466 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL365203.2-201ENST00000423444 196 ntBASIC3.16□□□□□ -1.9
FEN1P39748 RPL7P46-201ENST00000425129 740 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC079780.1-201ENST00000428259 207 ntBASIC3.16□□□□□ -1.9
FEN1P39748 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 MTCYBP39-201ENST00000437562 491 ntBASIC3.16□□□□□ -1.9
FEN1P39748 TRIM60P18-201ENST00000441518 828 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.16□□□□□ -1.9
FEN1P39748 PDSS1P2-201ENST00000449397 678 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
FEN1P39748 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
FEN1P39748 BZW1P2-201ENST00000473537 826 ntBASIC3.16□□□□□ -1.9
FEN1P39748 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.16□□□□□ -1.9
FEN1P39748 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.16□□□□□ -1.9
FEN1P39748 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 AC096751.1-202ENST00000502691 1067 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC006499.5-201ENST00000505037 514 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC017037.2-201ENST00000513850 890 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.16□□□□□ -1.9
FEN1P39748 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
FEN1P39748 RNU6-232P-201ENST00000517144 64 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.16□□□□□ -1.9
FEN1P39748 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.16□□□□□ -1.9
FEN1P39748 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.16□□□□□ -1.9
FEN1P39748 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.16□□□□□ -1.9
FEN1P39748 AC135628.1-201ENST00000568867 534 ntBASIC3.16□□□□□ -1.9
FEN1P39748 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
FEN1P39748 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
FEN1P39748 AL162713.1-201ENST00000604480 262 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL031176.1-201ENST00000604554 466 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC092354.2-201ENST00000607786 514 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL590282.1-201ENST00000610379 1136 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL590099.1-201ENST00000615276 138 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AL603755.1-201ENST00000619504 163 ntBASIC3.16□□□□□ -1.9
FEN1P39748 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
FEN1P39748 AC092192.1-201ENST00000633154 1018 ntBASIC3.16□□□□□ -1.9
FEN1P39748 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FEN1P39748 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FEN1P39748 MTND4P16-201ENST00000466108 1367 ntBASIC3.15□□□□□ -1.9
FEN1P39748 CR383658.2-201ENST00000547576 1525 ntBASIC3.15□□□□□ -1.9
FEN1P39748 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
FEN1P39748 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FEN1P39748 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FEN1P39748 AL672167.1-206ENST00000356293 943 ntBASIC3.15□□□□□ -1.91
FEN1P39748 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FEN1P39748 RNU6-500P-201ENST00000362349 107 ntBASIC3.15□□□□□ -1.91
FEN1P39748 RNU6-1074P-201ENST00000383995 104 ntBASIC3.15□□□□□ -1.91
FEN1P39748 RNU6-1207P-201ENST00000384343 107 ntBASIC3.15□□□□□ -1.91
FEN1P39748 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FEN1P39748 AL356421.1-201ENST00000403255 413 ntBASIC3.15□□□□□ -1.91
FEN1P39748 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.15□□□□□ -1.91
FEN1P39748 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 RN7SKP111-201ENST00000410349 271 ntBASIC3.15□□□□□ -1.91
FEN1P39748 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
FEN1P39748 RPL23AP39-201ENST00000415533 405 ntBASIC3.15□□□□□ -1.91
FEN1P39748 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.15□□□□□ -1.91
FEN1P39748 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.15□□□□□ -1.91
FEN1P39748 MTND2P18-201ENST00000419962 1030 ntBASIC3.15□□□□□ -1.91
FEN1P39748 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.15□□□□□ -1.91
FEN1P39748 BX119904.4-201ENST00000424402 301 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AL445669.1-201ENST00000426743 755 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.15□□□□□ -1.91
FEN1P39748 AL445567.1-201ENST00000439121 144 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC093392.2-201ENST00000450682 337 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms