Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC008379.1-201ENST00000463655 464 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN4AP35499 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN4AP35499 RNU4-60P-201ENST00000517239 135 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC104986.1-201ENST00000517978 436 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN4AP35499 PTP4A1P6-201ENST00000531034 478 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC010378.1-201ENST00000619270 362 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC106730.3-201ENST00000624568 641 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 MIR4496-201ENST00000635896 61 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN4AP35499 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SCN4AP35499 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN4AP35499 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SCN4AP35499 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN4AP35499 ENSAP3-201ENST00000312710 333 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 MIR518E-201ENST00000385252 88 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 HSPE1P26-201ENST00000405341 275 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC246680.2-201ENST00000422106 389 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN4AP35499 AL512661.1-201ENST00000434586 1253 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC092170.1-201ENST00000440211 356 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN4AP35499 TPTE2P6-202ENST00000445572 1007 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 TRBV26-201ENST00000456572 344 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC078857.1-201ENST00000469870 667 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.61□□□□□ -1.99
SCN4AP35499 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN4AP35499 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN4AP35499 AC006518.2-201ENST00000542513 940 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 OR6C73P-201ENST00000546432 358 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN4AP35499 AC115085.1-201ENST00000588924 229 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC098483.2-201ENST00000603158 454 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC083899.3-201ENST00000603413 594 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC004943.3-201ENST00000624116 600 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC138649.5-201ENST00000637456 137 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 AC011155.1-201ENST00000316512 456 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 RNY1P10-201ENST00000363268 113 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN4AP35499 DNAJC19P6-201ENST00000401853 280 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN4AP35499 AC098826.1-201ENST00000433943 471 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 AC023347.2-201ENST00000433994 462 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN4AP35499 AC027673.1-201ENST00000456245 405 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN4AP35499 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.6□□□□□ -1.99
SCN4AP35499 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN4AP35499 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 AC011468.4-201ENST00000603942 409 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN4AP35499 AC139769.3-201ENST00000618383 175 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN4AP35499 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.6□□□□□ -1.99
SCN4AP35499 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.59□□□□□ -1.99
SCN4AP35499 MIR378A-201ENST00000362177 66 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 RNU6-1151P-201ENST00000384684 107 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SCN4AP35499 CYCSP49-201ENST00000420810 319 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.59□□□□□ -1.99
SCN4AP35499 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN4AP35499 RPL7P55-201ENST00000450522 746 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AC233279.1-201ENST00000455300 423 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.59□□□□□ -1.99
SCN4AP35499 RPS26P21-201ENST00000475397 348 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 RPL38P4-201ENST00000502376 214 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 SNORA76.2-201ENST00000517095 137 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN4AP35499 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN4AP35499 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SCN4AP35499 MTND4LP25-201ENST00000570218 163 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AC012254.4-201ENST00000588843 273 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN4AP35499 AC068620.3-201ENST00000602749 560 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 RPAP2P1-201ENST00000603626 1168 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AP000787.2-201ENST00000604432 568 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AP005229.2-201ENST00000609980 697 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SCN4AP35499 AP006248.3-201ENST00000623580 594 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 AC010872.1-201ENST00000624225 675 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN4AP35499 U6.107-201ENST00000637108 79 ntBASIC2.59□□□□□ -1.99
SCN4AP35499 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN4AP35499 MTATP6P31-201ENST00000406985 692 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms