Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL360181.4-201ENST00000621752 134 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 Z69908.1-201ENST00000622603 247 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AL356585.4-201ENST00000623078 1229 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 U6.98-201ENST00000637157 84 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 CR381670.1-201ENST00000624291 1693 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HOXC8P31273 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 AC007256.1-201ENST00000392253 2765 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC8P31273 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HOXC8P31273 Y_RNA.51-201ENST00000362725 102 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AL031679.1-201ENST00000400616 525 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AL031577.2-201ENST00000404133 280 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC8P31273 Z99755.1-201ENST00000414048 380 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC063979.1-201ENST00000415539 377 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 AL035407.1-201ENST00000429211 571 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AL590233.1-201ENST00000430017 456 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 MTCO2P16-201ENST00000436962 677 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HOXC8P31273 AL357552.1-201ENST00000445254 415 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 MTCO2P7-201ENST00000446518 666 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AL671855.1-201ENST00000446875 1203 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC8P31273 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 MTND4LP3-201ENST00000468320 276 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 RPL27AP5-201ENST00000469428 449 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC109925.1-201ENST00000478069 331 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC104685.1-201ENST00000502445 371 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC020893.1-201ENST00000502452 580 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXC8P31273 RNU6-678P-201ENST00000516832 109 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 OR5AK1P-201ENST00000524837 922 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC8P31273 SYF2P1-201ENST00000550658 413 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC8P31273 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC8P31273 AC005951.1-201ENST00000576706 485 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC112220.3-201ENST00000605502 502 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC245297.2-201ENST00000610119 565 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 AC073114.1-201ENST00000612027 490 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 OR4G11P-202ENST00000642116 1414 ntBASIC3.69□□□□□ -1.82
HOXC8P31273 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC8P31273 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
HOXC8P31273 AL079305.1-201ENST00000623159 3008 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC8P31273 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC8P31273 RPL23AP57-201ENST00000332361 466 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXC8P31273 RNU6-328P-201ENST00000390887 106 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 RNU4-65P-201ENST00000410473 140 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 RNU6-920P-201ENST00000410926 92 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 ZNF885P-201ENST00000420174 1098 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 DUTP6-201ENST00000425573 462 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AL589823.1-201ENST00000429577 183 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AC006028.1-201ENST00000438379 402 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC009961.3-201ENST00000449832 765 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 OR6C5P-201ENST00000452388 923 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 RPL23AP31-201ENST00000456160 467 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 SNORA59A-201ENST00000459326 152 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC8P31273 RAP1BP2-201ENST00000478270 544 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AC006445.1-201ENST00000491925 405 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AC023424.2-201ENST00000493479 777 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXC8P31273 Y_RNA.655-201ENST00000515919 96 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXC8P31273 OR5AP1P-201ENST00000529730 940 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 SNRPGP16-201ENST00000533275 226 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 SETP7-201ENST00000552169 453 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXC8P31273 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC8P31273 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC8P31273 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXC8P31273 FAM60BP-201ENST00000578364 658 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms