Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNA5SP119-201ENST00000362715 117 ntBASIC3.12□□□□□ -1.91
SHC1P29353 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
SHC1P29353 PTMAP5-201ENST00000393073 333 ntBASIC3.12□□□□□ -1.91
SHC1P29353 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHC1P29353 DSTNP4-201ENST00000399472 474 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL121972.1-201ENST00000402023 252 ntBASIC3.12□□□□□ -1.91
SHC1P29353 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 RNA5SP31-201ENST00000411144 127 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHC1P29353 RPL7P30-201ENST00000420888 709 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 GLRXP1-201ENST00000423261 334 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 AC104651.1-201ENST00000427559 735 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 MTCO2P3-201ENST00000442543 421 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 MTCO1P48-201ENST00000448024 1096 ntBASIC3.12□□□□□ -1.91
SHC1P29353 RPL39P6-201ENST00000448289 150 ntBASIC3.12□□□□□ -1.91
SHC1P29353 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 SSXP1-201ENST00000453640 473 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC007967.1-201ENST00000455422 1159 ntBASIC3.12□□□□□ -1.91
SHC1P29353 CEACAMP4-201ENST00000457676 421 ntBASIC3.12□□□□□ -1.91
SHC1P29353 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AC092757.1-201ENST00000467293 467 ntBASIC3.12□□□□□ -1.91
SHC1P29353 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.12□□□□□ -1.91
SHC1P29353 RPL9P33-201ENST00000484311 566 ntBASIC3.12□□□□□ -1.91
SHC1P29353 RPL37P25-201ENST00000507308 276 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 CDC42P4-201ENST00000510507 563 ntBASIC3.12□□□□□ -1.91
SHC1P29353 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.12□□□□□ -1.91
SHC1P29353 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHC1P29353 RNU6-150P-201ENST00000516237 95 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 OR4A45P-201ENST00000529954 901 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 AP004242.1-201ENST00000533701 349 ntBASIC3.12□□□□□ -1.91
SHC1P29353 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.12□□□□□ -1.91
SHC1P29353 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.12□□□□□ -1.91
SHC1P29353 AC245505.1-201ENST00000556398 224 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC074050.1-201ENST00000563247 211 ntBASIC3.12□□□□□ -1.91
SHC1P29353 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 AC091489.2-201ENST00000566263 604 ntBASIC3.12□□□□□ -1.91
SHC1P29353 LARP7P2-201ENST00000575306 125 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.12□□□□□ -1.91
SHC1P29353 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 AP003465.2-201ENST00000602571 373 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AP000403.1-201ENST00000603349 851 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC103710.4-201ENST00000609301 899 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC012531.5-201ENST00000611375 151 ntBASIC3.12□□□□□ -1.91
SHC1P29353 AC243773.3-201ENST00000613270 256 ntBASIC3.12□□□□□ -1.91
SHC1P29353 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHC1P29353 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SHC1P29353 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SHC1P29353 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHC1P29353 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 OR4G11P-202ENST00000642116 1414 ntBASIC3.11□□□□□ -1.91
SHC1P29353 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 RNU5F-6P-201ENST00000362979 116 ntBASIC3.11□□□□□ -1.91
SHC1P29353 Y_RNA.97-201ENST00000363094 102 ntBASIC3.11□□□□□ -1.91
SHC1P29353 RNU6-921P-201ENST00000384361 107 ntBASIC3.11□□□□□ -1.91
SHC1P29353 RNU6-441P-201ENST00000384545 106 ntBASIC3.11□□□□□ -1.91
SHC1P29353 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 AC069218.2-201ENST00000411665 344 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.11□□□□□ -1.91
SHC1P29353 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
SHC1P29353 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.11□□□□□ -1.91
SHC1P29353 AC010975.2-201ENST00000427781 588 ntBASIC3.11□□□□□ -1.91
SHC1P29353 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 RPS26P56-201ENST00000444468 240 ntBASIC3.11□□□□□ -1.91
SHC1P29353 VN1R10P-201ENST00000447106 875 ntBASIC3.11□□□□□ -1.91
SHC1P29353 HMGN3P1-201ENST00000453847 193 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC093899.1-201ENST00000457984 376 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC097493.1-201ENST00000463958 372 ntBASIC3.11□□□□□ -1.91
SHC1P29353 RPL9P32-201ENST00000464118 620 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC023598.1-201ENST00000472521 361 ntBASIC3.11□□□□□ -1.91
SHC1P29353 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AP001086.1-201ENST00000494882 321 ntBASIC3.11□□□□□ -1.91
SHC1P29353 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.11□□□□□ -1.91
SHC1P29353 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.11□□□□□ -1.91
SHC1P29353 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHC1P29353 AC005921.1-201ENST00000510589 286 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms