Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 AL049874.1-201ENST00000489560 388 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ABCD3P28288 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ABCD3P28288 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
ABCD3P28288 SNORA70.14-201ENST00000516205 110 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 AP000873.5-201ENST00000533906 236 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.66□□□□□ -1.82
ABCD3P28288 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
ABCD3P28288 AC120057.2-201ENST00000571520 271 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.66□□□□□ -1.82
ABCD3P28288 AC091167.4-201ENST00000605079 184 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 AC108747.1-201ENST00000609508 535 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 AC010133.1-201ENST00000615809 842 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 AC009090.3-201ENST00000616553 565 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 SNHG22-203ENST00000617833 660 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
ABCD3P28288 AL139089.1-201ENST00000620372 975 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 AC099654.13-201ENST00000639774 207 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ABCD3P28288 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
ABCD3P28288 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ABCD3P28288 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ABCD3P28288 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.66□□□□□ -1.82
ABCD3P28288 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ABCD3P28288 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
ABCD3P28288 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ABCD3P28288 CUL1P1-201ENST00000509510 2425 ntBASIC3.65□□□□□ -1.82
ABCD3P28288 HSPA8P1-201ENST00000425843 1833 ntBASIC3.65□□□□□ -1.82
ABCD3P28288 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
ABCD3P28288 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
ABCD3P28288 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ABCD3P28288 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ABCD3P28288 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ABCD3P28288 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ABCD3P28288 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ABCD3P28288 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 RNU6-1284P-201ENST00000363701 100 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 RNA5SP479-201ENST00000364858 117 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 RNA5SP107-201ENST00000411358 122 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 SPA17P1-201ENST00000416656 452 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 UBE2D3P2-201ENST00000424409 445 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.65□□□□□ -1.83
ABCD3P28288 AC083863.1-201ENST00000438811 231 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 PGBD4P3-201ENST00000440731 581 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.65□□□□□ -1.83
ABCD3P28288 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.65□□□□□ -1.83
ABCD3P28288 SSXP1-201ENST00000453640 473 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 SNORD42A-201ENST00000459584 64 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 RPS20P20-201ENST00000460498 340 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.65□□□□□ -1.83
ABCD3P28288 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.65□□□□□ -1.83
ABCD3P28288 RPS27AP1-201ENST00000475545 471 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC078785.3-201ENST00000476607 425 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC068724.1-201ENST00000487100 792 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.65□□□□□ -1.83
ABCD3P28288 RNU6-64P-201ENST00000517119 105 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.65□□□□□ -1.83
ABCD3P28288 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
ABCD3P28288 AP002453.2-201ENST00000533503 320 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC123904.3-201ENST00000547218 814 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 YPEL5P3-201ENST00000547227 352 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.65□□□□□ -1.83
ABCD3P28288 MIR4644-201ENST00000579929 84 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 MIR3682-201ENST00000581338 84 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC009977.1-201ENST00000586015 570 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC073544.2-201ENST00000601155 540 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AL592436.1-201ENST00000605135 558 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC087752.4-201ENST00000605911 462 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 AC103710.3-201ENST00000608157 948 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 AC091953.2-201ENST00000623979 160 ntBASIC3.65□□□□□ -1.83
ABCD3P28288 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ABCD3P28288 OR4G2P-202ENST00000641004 1759 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ABCD3P28288 AC021755.1-201ENST00000559747 1447 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ABCD3P28288 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.64□□□□□ -1.83
ABCD3P28288 MIR1193-201ENST00000408109 78 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCD3P28288 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCD3P28288 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCD3P28288 SNRPEP4-201ENST00000435815 279 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 NDUFB4P6-201ENST00000436819 366 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.64□□□□□ -1.83
ABCD3P28288 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ABCD3P28288 RNU6-956P-201ENST00000458868 103 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 MTCO2P29-201ENST00000465212 189 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 RPL31P60-201ENST00000478450 367 ntBASIC3.64□□□□□ -1.83
ABCD3P28288 RPL31P61-201ENST00000496160 376 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms