Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
APCP25054 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.37□□□□□ -2.19
APCP25054 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.37□□□□□ -2.19
APCP25054 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.37□□□□□ -2.19
APCP25054 RNU6-826P-201ENST00000516827 104 ntBASIC1.37□□□□□ -2.19
APCP25054 AL391646.1-201ENST00000603860 190 ntBASIC1.37□□□□□ -2.19
APCP25054 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
APCP25054 CDC27P3-201ENST00000635418 1910 ntBASIC1.37□□□□□ -2.19
APCP25054 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
APCP25054 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
APCP25054 Y_RNA.393-201ENST00000383936 102 ntBASIC1.36□□□□□ -2.19
APCP25054 NEK4P1-201ENST00000433383 879 ntBASIC1.36□□□□□ -2.19
APCP25054 Y_RNA.681-201ENST00000516445 113 ntBASIC1.36□□□□□ -2.19
APCP25054 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.36□□□□□ -2.19
APCP25054 AC245036.5-201ENST00000596330 847 ntBASIC1.36□□□□□ -2.19
APCP25054 7SK.7-201ENST00000603504 247 ntBASIC1.36□□□□□ -2.19
APCP25054 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
APCP25054 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APCP25054 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
APCP25054 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.36□□□□□ -2.19
APCP25054 AC109486.1-201ENST00000486833 374 ntBASIC1.36□□□□□ -2.19
APCP25054 AC104986.1-201ENST00000517978 436 ntBASIC1.36□□□□□ -2.19
APCP25054 AC011712.1-201ENST00000588959 234 ntBASIC1.36□□□□□ -2.19
APCP25054 AC060766.3-201ENST00000591442 263 ntBASIC1.36□□□□□ -2.19
APCP25054 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.36□□□□□ -2.19
APCP25054 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.36□□□□□ -2.19
APCP25054 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.36□□□□□ -2.19
APCP25054 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.36□□□□□ -2.19
APCP25054 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
APCP25054 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.36□□□□□ -2.19
APCP25054 Y_RNA.433-201ENST00000384089 102 ntBASIC1.35□□□□□ -2.19
APCP25054 RNA5SP338-201ENST00000410495 85 ntBASIC1.35□□□□□ -2.19
APCP25054 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.35□□□□□ -2.19
APCP25054 AL645568.3-201ENST00000433683 316 ntBASIC1.35□□□□□ -2.19
APCP25054 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.35□□□□□ -2.19
APCP25054 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.35□□□□□ -2.19
APCP25054 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.35□□□□□ -2.19
APCP25054 AC104435.1-201ENST00000483483 166 ntBASIC1.35□□□□□ -2.19
APCP25054 AC090071.1-201ENST00000507713 644 ntBASIC1.35□□□□□ -2.19
APCP25054 LDHBP3-201ENST00000514909 822 ntBASIC1.35□□□□□ -2.19
APCP25054 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.35□□□□□ -2.19
APCP25054 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.35□□□□□ -2.19
APCP25054 ABI1P1-201ENST00000603375 1120 ntBASIC1.35□□□□□ -2.19
APCP25054 AC008121.3-201ENST00000618726 433 ntBASIC1.35□□□□□ -2.19
APCP25054 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
APCP25054 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
APCP25054 FNDC3CP-201ENST00000420795 1155 ntBASIC1.35□□□□□ -2.19
APCP25054 AL365400.1-201ENST00000431854 640 ntBASIC1.35□□□□□ -2.19
APCP25054 AL157827.1-201ENST00000447622 132 ntBASIC1.35□□□□□ -2.19
APCP25054 RPL31P41-201ENST00000477967 372 ntBASIC1.35□□□□□ -2.19
APCP25054 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.35□□□□□ -2.19
APCP25054 AIG1P1-201ENST00000503376 148 ntBASIC1.35□□□□□ -2.19
APCP25054 TBCAP3-201ENST00000512475 312 ntBASIC1.35□□□□□ -2.19
APCP25054 RN7SKP5-201ENST00000517045 272 ntBASIC1.35□□□□□ -2.19
APCP25054 MIR4448-201ENST00000584360 86 ntBASIC1.35□□□□□ -2.19
APCP25054 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.35□□□□□ -2.19
APCP25054 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
APCP25054 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
APCP25054 DYNLT3P1-201ENST00000378574 347 ntBASIC1.34□□□□□ -2.19
APCP25054 DNAJC19P6-201ENST00000401853 280 ntBASIC1.34□□□□□ -2.19
APCP25054 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.34□□□□□ -2.19
APCP25054 AC005517.2-201ENST00000424673 553 ntBASIC1.34□□□□□ -2.19
APCP25054 HMGB1P45-201ENST00000435986 653 ntBASIC1.34□□□□□ -2.19
APCP25054 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.34□□□□□ -2.19
APCP25054 RN7SL274P-201ENST00000492268 272 ntBASIC1.34□□□□□ -2.19
APCP25054 AC034222.1-201ENST00000494052 532 ntBASIC1.34□□□□□ -2.19
APCP25054 AC021146.7-201ENST00000509604 775 ntBASIC1.34□□□□□ -2.19
APCP25054 FABP5P5-201ENST00000515537 406 ntBASIC1.34□□□□□ -2.19
APCP25054 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.34□□□□□ -2.19
APCP25054 AC103810.1-201ENST00000579873 453 ntBASIC1.34□□□□□ -2.19
APCP25054 MTATP6P3-201ENST00000581686 676 ntBASIC1.34□□□□□ -2.19
APCP25054 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.34□□□□□ -2.19
APCP25054 MIR98-201ENST00000606724 119 ntBASIC1.34□□□□□ -2.19
APCP25054 STMN1P1-201ENST00000617809 440 ntBASIC1.34□□□□□ -2.19
APCP25054 AP000553.5-201ENST00000641933 54 ntBASIC1.34□□□□□ -2.19
APCP25054 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.34□□□□□ -2.19
APCP25054 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.34□□□□□ -2.19
APCP25054 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
APCP25054 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.34□□□□□ -2.19
APCP25054 HMGN2P19-201ENST00000425149 265 ntBASIC1.34□□□□□ -2.19
APCP25054 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
APCP25054 FAM106DP-201ENST00000586416 501 ntBASIC1.34□□□□□ -2.19
APCP25054 AL627230.5-201ENST00000619807 58 ntBASIC1.34□□□□□ -2.19
APCP25054 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
APCP25054 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
APCP25054 RNA5SP239-201ENST00000410218 129 ntBASIC1.34□□□□□ -2.2
APCP25054 BX510359.4-201ENST00000423750 193 ntBASIC1.34□□□□□ -2.2
APCP25054 AL022400.1-201ENST00000423946 935 ntBASIC1.34□□□□□ -2.2
APCP25054 AL138785.1-201ENST00000425821 331 ntBASIC1.34□□□□□ -2.2
APCP25054 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.34□□□□□ -2.2
APCP25054 AC011979.1-201ENST00000472300 483 ntBASIC1.34□□□□□ -2.2
APCP25054 AC098583.1-201ENST00000480875 255 ntBASIC1.34□□□□□ -2.2
APCP25054 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.34□□□□□ -2.2
APCP25054 SULT1C2P1-202ENST00000562418 459 ntBASIC1.34□□□□□ -2.2
APCP25054 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.34□□□□□ -2.2
APCP25054 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
APCP25054 AC098934.3-201ENST00000430450 190 ntBASIC1.33□□□□□ -2.2
APCP25054 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.33□□□□□ -2.2
APCP25054 TPT1P14-201ENST00000448018 505 ntBASIC1.33□□□□□ -2.2
APCP25054 AL590664.1-201ENST00000448065 339 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms