Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 AC015688.2-201ENST00000584523 262 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC006116.7-201ENST00000590141 756 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC013444.2-201ENST00000603317 787 ntBASIC2.51□□□□□ -2.01
USF1P22415 AL445435.1-201ENST00000604232 665 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC004009.2-201ENST00000623016 728 ntBASIC2.51□□□□□ -2.01
USF1P22415 AP000676.4-201ENST00000624659 623 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.51□□□□□ -2.01
USF1P22415 AC084035.1-201ENST00000634543 607 ntBASIC2.51□□□□□ -2.01
USF1P22415 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.51□□□□□ -2.01
USF1P22415 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.5□□□□□ -2.01
USF1P22415 AC009812.4-201ENST00000569134 1805 ntBASIC2.5□□□□□ -2.01
USF1P22415 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 DEFB108F-201ENST00000344638 222 ntBASIC2.5□□□□□ -2.01
USF1P22415 MIR135A2-201ENST00000384854 100 ntBASIC2.5□□□□□ -2.01
USF1P22415 SNORD65.1-201ENST00000390889 71 ntBASIC2.5□□□□□ -2.01
USF1P22415 RNA5SP252-201ENST00000391131 119 ntBASIC2.5□□□□□ -2.01
USF1P22415 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.5□□□□□ -2.01
USF1P22415 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 NDUFB4P6-201ENST00000436819 366 ntBASIC2.5□□□□□ -2.01
USF1P22415 PTGES3P1-201ENST00000439531 483 ntBASIC2.5□□□□□ -2.01
USF1P22415 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 RPS24P13-201ENST00000442520 397 ntBASIC2.5□□□□□ -2.01
USF1P22415 RPL39P6-201ENST00000448289 150 ntBASIC2.5□□□□□ -2.01
USF1P22415 AL031183.1-201ENST00000457667 207 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC104164.3-201ENST00000467363 1258 ntBASIC2.5□□□□□ -2.01
USF1P22415 RPS29P26-201ENST00000477483 171 ntBASIC2.5□□□□□ -2.01
USF1P22415 PRELID3BP6-201ENST00000503839 571 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC118282.1-201ENST00000506408 765 ntBASIC2.5□□□□□ -2.01
USF1P22415 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USF1P22415 RN7SKP43-201ENST00000516173 320 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 DEFB108D-201ENST00000527787 222 ntBASIC2.5□□□□□ -2.01
USF1P22415 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USF1P22415 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.5□□□□□ -2.01
USF1P22415 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.5□□□□□ -2.01
USF1P22415 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC008507.2-201ENST00000588402 1176 ntBASIC2.5□□□□□ -2.01
USF1P22415 GLUD1P4-201ENST00000590914 418 ntBASIC2.5□□□□□ -2.01
USF1P22415 HSPE1P7-201ENST00000604681 321 ntBASIC2.5□□□□□ -2.01
USF1P22415 AP002802.2-201ENST00000605877 235 ntBASIC2.5□□□□□ -2.01
USF1P22415 TUG1_1.1-201ENST00000610654 145 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC005332.6-201ENST00000613178 446 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 AC006249.1-201ENST00000621223 471 ntBASIC2.5□□□□□ -2.01
USF1P22415 AC010872.1-201ENST00000624225 675 ntBASIC2.5□□□□□ -2.01
USF1P22415 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USF1P22415 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
USF1P22415 AC091564.4-201ENST00000533934 2194 ntBASIC2.5□□□□□ -2.01
USF1P22415 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USF1P22415 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
USF1P22415 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.49□□□□□ -2.01
USF1P22415 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USF1P22415 RNU6-1027P-201ENST00000383998 107 ntBASIC2.49□□□□□ -2.01
USF1P22415 SNRPEP2-201ENST00000397592 279 ntBASIC2.49□□□□□ -2.01
USF1P22415 AL356131.1-201ENST00000405826 414 ntBASIC2.49□□□□□ -2.01
USF1P22415 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.49□□□□□ -2.01
USF1P22415 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.49□□□□□ -2.01
USF1P22415 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 AC024082.2-201ENST00000434771 238 ntBASIC2.49□□□□□ -2.01
USF1P22415 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
USF1P22415 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
USF1P22415 AC079776.3-201ENST00000450665 370 ntBASIC2.49□□□□□ -2.01
USF1P22415 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 AC026410.2-201ENST00000460281 156 ntBASIC2.49□□□□□ -2.01
USF1P22415 RPS15AP17-201ENST00000470598 390 ntBASIC2.49□□□□□ -2.01
USF1P22415 RPL31P50-201ENST00000471002 296 ntBASIC2.49□□□□□ -2.01
USF1P22415 SETP11-201ENST00000473027 690 ntBASIC2.49□□□□□ -2.01
USF1P22415 AC117440.1-201ENST00000474107 571 ntBASIC2.49□□□□□ -2.01
USF1P22415 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USF1P22415 AL359273.1-201ENST00000510918 627 ntBASIC2.49□□□□□ -2.01
USF1P22415 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USF1P22415 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.49□□□□□ -2.01
USF1P22415 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USF1P22415 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 COX6CP8-201ENST00000522620 226 ntBASIC2.49□□□□□ -2.01
USF1P22415 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.49□□□□□ -2.01
USF1P22415 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.49□□□□□ -2.01
USF1P22415 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.49□□□□□ -2.01
USF1P22415 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.49□□□□□ -2.01
USF1P22415 MIR3921-201ENST00000577308 85 ntBASIC2.49□□□□□ -2.01
USF1P22415 AC011260.1-201ENST00000578420 472 ntBASIC2.49□□□□□ -2.01
USF1P22415 MIR5708-201ENST00000579723 85 ntBASIC2.49□□□□□ -2.01
USF1P22415 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.49□□□□□ -2.01
USF1P22415 AC080013.4-201ENST00000607624 649 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms