Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.6□□□□□ -1.67
ATF4P18848 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATF4P18848 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.6□□□□□ -1.67
ATF4P18848 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 MTCO2P12-201ENST00000427426 682 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC005534.2-201ENST00000431047 433 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RPS6P12-201ENST00000432491 726 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC094019.1-201ENST00000434678 472 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RANP8-201ENST00000444720 713 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 AL163193.1-201ENST00000444895 788 ntBASIC4.6□□□□□ -1.67
ATF4P18848 CECR9-201ENST00000453421 199 ntBASIC4.6□□□□□ -1.67
ATF4P18848 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATF4P18848 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
ATF4P18848 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 RPS4XP13-201ENST00000483219 789 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC022493.1-201ENST00000492984 337 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.6□□□□□ -1.67
ATF4P18848 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.6□□□□□ -1.67
ATF4P18848 ZNF519P4-201ENST00000514008 125 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RNU6-1170P-201ENST00000515974 106 ntBASIC4.6□□□□□ -1.67
ATF4P18848 MIR892C-201ENST00000516410 77 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC105031.1-201ENST00000518550 476 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.6□□□□□ -1.67
ATF4P18848 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.6□□□□□ -1.67
ATF4P18848 IMMP1LP2-201ENST00000552954 492 ntBASIC4.6□□□□□ -1.67
ATF4P18848 ZNF192P1-203ENST00000565888 810 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 MIR4701-201ENST00000583094 63 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AL161729.3-201ENST00000603533 673 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.6□□□□□ -1.67
ATF4P18848 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 AC010378.1-201ENST00000619270 362 ntBASIC4.6□□□□□ -1.67
ATF4P18848 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.6□□□□□ -1.67
ATF4P18848 AL355480.1-201ENST00000629041 99 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.6□□□□□ -1.67
ATF4P18848 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.6□□□□□ -1.67
ATF4P18848 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATF4P18848 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ATF4P18848 OR56B2P-202ENST00000641377 2453 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
ATF4P18848 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
ATF4P18848 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.59□□□□□ -1.67
ATF4P18848 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.59□□□□□ -1.67
ATF4P18848 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATF4P18848 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATF4P18848 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATF4P18848 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
ATF4P18848 SNORA63-201ENST00000363450 132 ntBASIC4.59□□□□□ -1.67
ATF4P18848 MIR323B-201ENST00000385269 82 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AL157702.1-201ENST00000398764 426 ntBASIC4.59□□□□□ -1.67
ATF4P18848 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATF4P18848 RNU2-68P-201ENST00000410878 191 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AF186996.5-201ENST00000418098 904 ntBASIC4.59□□□□□ -1.67
ATF4P18848 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.59□□□□□ -1.67
ATF4P18848 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.59□□□□□ -1.67
ATF4P18848 RPS15AP6-201ENST00000420703 385 ntBASIC4.59□□□□□ -1.67
ATF4P18848 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.59□□□□□ -1.67
ATF4P18848 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.59□□□□□ -1.67
ATF4P18848 HMGB1P12-201ENST00000438594 598 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC016027.4-201ENST00000450866 277 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC068228.1-201ENST00000461723 211 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC092865.4-201ENST00000477936 615 ntBASIC4.59□□□□□ -1.67
ATF4P18848 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.59□□□□□ -1.67
ATF4P18848 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.59□□□□□ -1.67
ATF4P18848 BTF3P13-201ENST00000513224 490 ntBASIC4.59□□□□□ -1.67
ATF4P18848 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.59□□□□□ -1.67
ATF4P18848 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATF4P18848 AC025423.5-201ENST00000550230 219 ntBASIC4.59□□□□□ -1.67
ATF4P18848 TRAV37-201ENST00000553906 342 ntBASIC4.59□□□□□ -1.67
ATF4P18848 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.59□□□□□ -1.67
ATF4P18848 AC100830.2-201ENST00000581636 240 ntBASIC4.59□□□□□ -1.67
ATF4P18848 MIR5690-201ENST00000583739 73 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.59□□□□□ -1.67
ATF4P18848 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.59□□□□□ -1.67
ATF4P18848 RPSAP75-201ENST00000605848 301 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AL139124.1-201ENST00000609123 421 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC005344.1-201ENST00000613391 459 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC084781.2-201ENST00000615568 161 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AL355365.1-201ENST00000616480 294 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AL713922.2-201ENST00000619384 716 ntBASIC4.59□□□□□ -1.67
ATF4P18848 FAM27E2-201ENST00000619668 403 ntBASIC4.59□□□□□ -1.67
ATF4P18848 AC090740.1-201ENST00000623193 2262 ntBASIC4.59□□□□□ -1.67
ATF4P18848 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.59□□□□□ -1.67
ATF4P18848 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ATF4P18848 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.59□□□□□ -1.68
ATF4P18848 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.58□□□□□ -1.68
ATF4P18848 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.58□□□□□ -1.68
ATF4P18848 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 COX6B1P3-201ENST00000312310 260 ntBASIC4.58□□□□□ -1.68
ATF4P18848 RNU6-593P-201ENST00000364716 112 ntBASIC4.58□□□□□ -1.68
ATF4P18848 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 RNU6-370P-201ENST00000411008 104 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AL096829.1-201ENST00000413677 457 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms